Swingsia samuiensis: E3D00_02425
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Entry
E3D00_02425 CDS
T06080
Name
(GenBank) lytic transglycosylase domain-containing protein
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
ssam
Swingsia samuiensis
Brite
KEGG Orthology (KO) [BR:
ssam00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ssam01011
]
E3D00_02425
Enzymes [BR:
ssam01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
E3D00_02425
Peptidoglycan biosynthesis and degradation proteins [BR:
ssam01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
E3D00_02425
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Gene cluster
GFIT
Motif
Pfam:
SLT
Motif
Other DBs
NCBI-ProteinID:
QDH17949
UniProt:
A0A4Y6UK07
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All DBs
Position
complement(506859..508787)
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AA seq
642 aa
AA seq
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MLVSVLILAGGTFHAGCAASVRPLPPQPDHAGDETAFAEIQIPAHGGDAVGLPHPLTAAD
ASRYRAIFQAQRRGDTQTAIEQTRLLKNTVLLGDVLADRYLMPNAHPNVEQLKAWLRTYP
TSPDAANIQKVLVGLAPAGSVQVQNFTKSLSPEDRPDTVHLPDGKTSDPLSKAFTRNPLL
DRTVQERVASGEKGAMSALHLIDVTPGMTGAYASQLYGEVALSLLAQGATRSALRIGCEG
FEKGKHQVGLAAYVAGLSAWREGHTDTAYELFQSAANSPVTSSELHAAAAFWAARSKARS
HAVSAYVSWLHRAANHHDTFYGMLASQTLEQGRKGHAHLADVDMEVTLHDPVPVLSEIDV
EAIGALAQGQQLYALLQVGERGRAEDLMRRMWPDLVADSARSRSLQLVAQAAGFEDLSEQ
MASLIMSVGAHPKEETEALPFPNLHPRNGFRMDPALVYALTRVESNFDSMAASGAGAHGL
MQIRPITASFVTQSHPVYDAHGQAVINIPADMVARLHNPSMNLEIGQLYVIYLAHQSDHA
GISATQAGGGDLVRVLASYNAGPGAIARWESNQSSSVHDPLFFIETLPNAETRDYVHKTL
TYTWRYAKKMGMAAPSLKSLTRAEWPSFKAERALAQEHIALN
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
ttgcttgtgagtgtgttaattttggccggtgggacttttcatgcaggatgtgcagcgagc
gtacgtcctctcccccctcagcctgatcatgcaggtgatgaaacagcatttgctgaaatt
caaataccagcccatggcggagatgcagttggtttaccgcatcctctgactgctgctgat
gctagtcgataccgagctatttttcaggctcaacgccgcggtgatacccagacggcgatt
gagcagacgcgattgttgaaaaatacagttcttctgggggatgttctggcggatcggtat
ttgatgccgaatgcacatcccaatgtggagcagcttaaagcgtggctgcgtacctatccc
acgtcacctgatgctgccaatattcagaaagtgttggtaggtcttgctcccgcagggagc
gttcaggttcagaattttacgaagtctctctctccggaagatcggccggatacggttcat
ttgcctgatgggaagacttcggatcctctatccaaagcctttacgcggaaccctctttta
gacaggacggttcaagaacgcgttgcttctggagaaaaaggggcgatgagtgcgttacac
ttaattgatgttactccgggtatgacaggggcttatgcgtctcaattatatggggaagtt
gcacttagtctcttagctcaaggagcaacgcgcagtgccttacgcattggatgcgaaggg
tttgaaaaaggcaaacatcaagtcggactggcggcatatgttgctggtctctcggcttgg
agagaagggcatactgacacggcttatgagctgtttcagtcagcggcgaattctcctgtt
acctcatcagaactacacgcagcggctgcattttgggctgctcgatctaaagcgcgtagt
catgctgtttctgcttatgtgtcgtggttgcaccgcgcggctaatcatcatgatacgttt
tatgggatgctcgcttctcaaacattagagcagggacgtaaagggcatgctcacttagct
gatgttgatatggaagtgacgcttcatgatcccgttccggttttgagtgaaattgatgtt
gaggcgattggcgctcttgctcaggggcagcagctttatgctctgcttcaagttggggag
cgtggacgcgctgaggatttgatgcgtcggatgtggcctgatttggtggcagatagtgca
cgatcaaggtctctacagttggttgctcaagctgctggttttgaagatttatcagagcaa
atggcgtctctgattatgagtgtgggggctcaccctaaagaggaaacagaggctttacct
ttccctaatctgcatccaagaaacggttttcggatggatcccgctctggtttatgcgctg
acgcgggttgaatccaattttgactcaatggctgcatccggagccggagcgcatgggttg
atgcaaattcggcctattacagcaagttttgtaacgcagtctcaccctgtgtatgatgct
catgggcaagcggttattaatatcccagccgatatggttgctcgactacataatccaagc
atgaatttagaaattgggcagctttacgttatttatctcgcgcatcaatctgaccatgca
ggcatttcggcaacacaagcaggcgggggggatcttgttcgtgttttggcctcttataat
gccggcccgggagctattgcgcgttgggaaagcaatcaaagctcaagcgtgcatgacccg
ctcttttttatagaaaccttgccgaatgctgaaacgcgtgattatgttcataaaacatta
acatatacatggcgttatgcaaaaaagatgggtatggcagctccctctttaaaatctttg
acgcgcgctgaatggccgtcatttaaggctgaacgggctttggctcaagaacatatagcc
ttgaattaa
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