Swingsia samuiensis: E3D00_02590
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Entry
E3D00_02590 CDS
T06080
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
ssam
Swingsia samuiensis
Pathway
ssam03410
Base excision repair
ssam03430
Mismatch repair
ssam03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ssam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
E3D00_02590 (recJ)
03430 Mismatch repair
E3D00_02590 (recJ)
03440 Homologous recombination
E3D00_02590 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssam03400
]
E3D00_02590 (recJ)
DNA repair and recombination proteins [BR:
ssam03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
E3D00_02590 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
E3D00_02590 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
E3D00_02590 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHHA1
DHH
Motif
Other DBs
NCBI-ProteinID:
QDH16582
UniProt:
A0A4Y6UG91
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All DBs
Position
538655..540454
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AA seq
599 aa
AA seq
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MTQENTSFVLNVSHSAGKRQWVWRNPLLAEADNRLALGLAQKANLPELLARILTARGVTA
ADAESFLNPRLRDLMPNPSLLKGMDEAAARLSQAIQNKEHIGLFGDYDVDGACGTALVAG
FLQELGCPITTHIPDRITEGYGPNTPALKKMVEAGASLIVCIDCGTAAIDILNDIAHKAN
VIVLDHHKPDGAILPNAIVVNPNRIDCNTGLGNICATAVAFLTMVATVRALRTKGWFTDT
LPAPDLLKSLDLTALATICDVMPLTGLNRAFVMQGLRVMARGERLGLATLASVAGVKNDA
SAMACGFALGPRINAGGRIAKSSLGLQLLLSHDSIEARTLADELDRVNRQRQTVETSILA
LAIEQAEKQIQEGHAVIFLYGETWHPGVVGIVAGRLKERFNRPVLVGAFENNIIKGSARS
VPGLDIGTAIISARQANTLLTGGGHAMAAGFSLDVEKAQQFHTLLDNIFDAARTLPPQEA
LKVDGILTIQGATLEIANQLGRLAPFGPENEEPTLAISNVRCKYSDRIGKDGNTLRVTLQ
SEDGRASLRGLVFRAADKPFAELLEDQTKPLLHIVGNLRVETWQERKNLTFFISDASNA
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgacacaagagaatacgagcttcgttctaaatgtctcgcacagcgctggtaaacggcaa
tgggtctggaggaatcctctcctcgcagaggcagataatcgactagccttagggcttgca
caaaaagcaaaccttcctgaactcctcgctcgtattctcactgctcgtggtgttacggct
gcagacgcagaaagctttcttaatccacgtttacgcgacttaatgcctaatccgtccctt
ttaaaaggaatggatgaggctgcggctcgtttatctcaagccattcaaaataaagaacat
attggcctttttggcgattatgacgttgatggtgcttgcggcactgctcttgttgctggc
ttccttcaagaacttgggtgtcccattacaactcatattcccgaccgtattacggaaggg
tatggccctaacacaccagcgctaaagaagatggttgaggctggggcatctctcattgtc
tgtattgactgcggaacagcagccatcgacattcttaatgacattgctcacaaggcaaat
gttattgtacttgaccatcacaaacccgatggggccattctacccaacgctattgttgtt
aatccgaaccgtatcgattgtaacacgggcctagggaatatttgcgctacagccgttgct
tttttaactatggttgcgactgtacgtgctcttcgtacgaaaggctggtttacagacacc
ctgcctgctcccgatcttctcaagagcctagatcttactgcactggccaccatttgcgat
gttatgccattaacagggcttaaccgtgcttttgtcatgcaaggcttacgcgttatggca
cgtggagagaggcttggtttagccactttagcctctgtggctggtgtcaaaaatgatgct
agcgccatggcatgtggctttgcacttggtccacgtattaatgcaggtggccgtattgcc
aaatcaagcttaggccttcagcttttactctctcacgatagtatcgaagcacgcaccctc
gcagatgagcttgatcgtgttaaccgacaacgccaaaccgttgaaacctctattttagca
cttgccattgaacaagcagaaaagcagatacaagaaggccatgctgttattttcctgtac
ggtgaaacgtggcatcctggcgtcgttggaattgtcgctggacgtttaaaggaacgcttc
aaccgccctgttctggttggtgcttttgaaaataatatcattaaaggatcagcccgctct
gttcctggccttgatattggaacagcgattatttctgccagacaagccaatactctcctt
acaggcggggggcatgctatggccgcaggcttttcattagatgtagagaaagcacagcaa
ttccatactctgcttgataatatttttgatgcggcacgcacacttccaccacaggaagca
ctgaaggtcgacgggattttaaccatccaaggcgctacccttgaaattgcgaaccaacta
ggccgccttgcaccttttggccctgagaatgaagagccaactctcgctatcagtaatgtc
cgctgtaagtatagtgaccgtatcggaaaagatggaaacactttgcgtgtcacgctccag
agcgaagatggtcgtgcgtccttgcgtgggcttgttttccgtgcggcagataaacctttt
gcagagctcttagaagatcagacgaagcctttgctccatatcgttgggaatttacgagtt
gaaacgtggcaagaacgaaaaaatttaacttttttcatttctgacgcatctaacgcttga
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