Swingsia samuiensis: E3D00_03025
Help
Entry
E3D00_03025 CDS
T06080
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
ssam
Swingsia samuiensis
Brite
KEGG Orthology (KO) [BR:
ssam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ssam03016
]
E3D00_03025 (rnd)
Enzymes [BR:
ssam01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
E3D00_03025 (rnd)
Transfer RNA biogenesis [BR:
ssam03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
E3D00_03025 (rnd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
QDH16660
UniProt:
A0A4Y6UIK2
LinkDB
All DBs
Position
complement(650167..651357)
Genome browser
AA seq
396 aa
AA seq
DB search
MRQKVPAFPAPVVLTSNEEVAHICAKLQTEPFVTIDTEFVREKTYWPELCLVQLAGLEDV
VVIDALAPDLDLSPLKDLLARKECVKVFHAARQDLEIFLHIFDELPHSVFDTQIAAMVAG
YGDQVGYDSLVGAITGRAIDKTHRFSDWSARPLSNAQINYAAADVTYLRLVYQALRKQLD
EQGRYHWADAEQAILIDEATFRPDPRKLWEKMKARTNNRRMLGILRELGAWREREAQNAN
IPRQRLIRDESLLEIAAVKPHDIDALVRVRGVTRGFAEGRMGETLLEAVRIGEKVPDSEL
PKPLSKSDRTKPSSALVALLKVLLAAKGEQHKVAPRLVASSEDLDRIALGEENVDALLGW
RREIFGLDALALVRGEIALAVVDGRVELKRVAEEIK
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcaaaaagtacctgcttttcctgcccctgttgttctgacctctaatgaagaggtc
gcacatatatgtgcgaagctccaaacagagccatttgttaccattgatacagagtttgtg
cgggaaaagacctattggccggagttgtgtctggttcagttggctggtttagaagatgtc
gttgttattgacgctttggcaccagatttggatctatctccattaaaagatttattggcg
cgcaaggaatgcgtgaaagtttttcatgccgcacgtcaggatttagaaatctttctgcat
atttttgatgaattaccacattcagtttttgacacacagattgcagctatggttgctgga
tatggtgatcaggtgggatatgacagtctggttggagcaatcactggacgtgctatcgat
aaaacacatcgatttagtgattggtctgcgcgccctttaagtaatgctcaaattaattat
gcagcggcggatgtaacatatttgcggctcgtctatcaggctctacgtaagcagctggat
gagcaagggcgttatcattgggctgatgccgagcaggccattttgattgatgaggcaaca
ttccgccctgatccgcgaaagctttgggagaaaatgaaagctcggaccaataatcgtcgg
atgttaggtatcctgcgggagttgggggcatggcgtgagcgggaagcccaaaatgccaat
attccaaggcaacgtctaatccgggatgagagcttacttgagattgctgctgtaaaacct
cacgatatagatgcattagtacgggtgcgcggtgtaacgcggggctttgctgaagggcga
atgggggaaactcttcttgaagctgttcgtataggtgaaaaggttcctgattcggagctg
ccaaagcctttatctaagtcagaccgtacaaagccttcatctgctttggtggcgctttta
aaggttttgctggccgcaaaaggagagcagcataaggttgccccgcgcttggttgcttct
tcagaagatctggatcggattgctttgggagaagaaaatgttgatgctttgctcgggtgg
cggcgagagatttttggtttagatgcgttagctttggttcgtggtgagattgctttggca
gttgttgatggacgagtcgagttgaaaagggtcgccgaagaaattaaataa
DBGET
integrated database retrieval system
