Swingsia samuiensis: E3D00_03040
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Entry
E3D00_03040 CDS
T06080
Symbol
addB
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
ssam
Swingsia samuiensis
Brite
KEGG Orthology (KO) [BR:
ssam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssam03400
]
E3D00_03040 (addB)
Enzymes [BR:
ssam01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
E3D00_03040 (addB)
DNA repair and recombination proteins [BR:
ssam03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
E3D00_03040 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
TPR_26
Motif
Other DBs
NCBI-ProteinID:
QDH16663
UniProt:
A0A4Y6UGI7
LinkDB
All DBs
Position
complement(655471..658524)
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AA seq
1017 aa
AA seq
DB search
MSKLITIAPSEPFLERVATEWLKQTDPVGKDKGGPGLLLVPSRRAGRALIEAFLRVLDGE
AALLPRIVAINDIDEEAWGGGDADLPPSVEPQRRLATLSLLILQTPIVSQGLDRTKGIDR
AWPLAKALADLMDEAERSGVDLSNSLPNAVDEQFSAHWQQTLQFLEIITEIWPQWLQEEG
VSNPIARQVARFQEQARSWSHTPPETPVWAIGFADGSAAVSDVLKAVLNLPQGKILLPGV
DLGLPDEVWENLPPAHPQAGLREILNALEAERSELVEWRSGRGDKREALFQKVMLPEQAI
AVWGQDLRPHDITGLSVLPAEDQQQEAQAIALILRNTVSVPGKTCALVTPDRALARRVGV
ELLRFGIHVDDSAGEALAQTPVAIFLRLIAMAAEAKLSPVALLAVLKHPLASLGRTPGDC
HASARQLERLLLRGPAPAPGIAGLRARLEELHERHRTRQEVYNDESSSADLPDVPEGPEE
FIDRIEKAFEPLLTLSEAVPLPDLLEALVKTAEMLAAREDELTASVEEERHPGERLWAGE
DGELLSRHLAALIQHTALLPSQKLGHLDSFLNTSMSGQTLTGFRSHRGGVELAHPRVSIL
GVLESRLLTFDVVVLGGLNETIWPPATDPGPWLSRPMRTKVGLPSPERQTGISAHDFLSK
VLSAKEVVFSNAARRDGSPGVPARWMVRLNAFLGGRGQKLPIHPALSWQRKMDQPLDGAE
TISPPEPRPPVALRPRRLSITEIERWMQDPYEIYAKHILKLRALDPLEEGAEHVDFGIIV
HAGMERIFKRYPHTWPENIDQKLKEIFFEELKKLNLHPARLNWWRPRLDRIADWVVQQEQ
AHREERKIVQRYIEASASYILQADYAPFKLTGRADRIDVADDGLATILDYKTGQPPTGAK
VEGGWSVQLVLEGALLAQGGFKDIPSLSTTRLLYWHLTGNNKSGEEKEVPGSRAKRSAED
LIKDALENLRSLVNAYDDLNQAYRSQPWAHYIPRYTDYAQLARVYEWRAAYAEGNEG
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
gtgagtaagctcattaccattgctccctctgagccatttttggagcgggttgccacggaa
tggttaaaacaaactgatccggttggaaaagataagggagggcccggactactcttggtt
cccagccgccgtgccggtcgagcattgatcgaagcttttttacgtgtccttgatggtgag
gcagcattgttgcctcgtattgtggctataaatgatattgatgaggaagcttggggaggt
ggggatgcggaccttcctccctctgttgagcctcagagacgccttgccacactctcctta
cttattttgcagaccccaattgtcagtcagggattagatcgtacaaaagggattgatcgg
gcttggccattggcgaaggccttggctgatttaatggatgaagcggagcggagtggtgtt
gatttatctaacagccttccaaacgcagtggacgagcaattttcagcccattggcagcag
acgttacagtttttagaaattattacagagatttggcctcaatggctgcaagaagaagga
gtatcaaatccgattgcacgacaggtcgcccggtttcaagagcaagcaagaagctggagc
catacccctccagaaacacctgtctgggcaattggatttgctgatggatccgcggctgtt
tcagatgttttgaaagctgttttgaacttgcctcaaggtaaaattttacttcctggggtc
gatttggggttgccggacgaggtttgggaaaatttaccacctgcacatcctcaagccggg
ttaagagagattttgaatgccttagaggcagagcgttcagaacttgtggaatggagaagt
ggccgaggggataaacgagaagctttatttcaaaaagttatgttgccagagcaggcaata
gcggtgtgggggcaggatttacgccctcatgacataacgggcttgtctgtgcttcctgca
gaagatcagcaacaggaagcgcaagccattgctcttattttgcgtaatacagtctccgtt
ccgggtaaaacatgtgcgctcgtaacgcccgatcgtgcgttggcccggcgtgtaggagtt
gagcttttgcgctttggtattcatgtggatgatagcgcaggcgaagcattggctcagaca
cctgttgctattttcctgcgccttatagctatggctgcagaagcaaagctttcccctgta
gcgcttttagcggttttaaagcatcccttggcctctttggggcgcaccccgggagattgt
catgcttctgcacggcagttagagcggcttcttttgagagggcctgctcctgctccggga
attgcggggttacgagcgcggttggaagagcttcatgagcgccatagaacgcgacaagaa
gtctataatgatgaaagctcttcagcggatttgcctgatgttccagaagggcctgaagag
tttattgatcgtattgaaaaagcgtttgagccacttttaaccctttctgaagctgtccct
ttacctgatttgttagaagccttggttaaaacggctgaaatgttagcggcaagagaggat
gagttaacagcatcagtagaagaagagcgacaccctggtgaaaggttgtgggcaggagag
gatggagagcttttatcccggcatttggcggcgctgattcaacatacagctctcttgccc
tctcaaaaattgggacatctggattcttttttaaacacgtctatgtctggtcaaacctta
acaggatttcgttcccataggggcggagtggaactagcgcatccccgggtttctattttg
ggtgttttggaatcacggttattgacctttgatgttgtcgttttaggtgggttgaatgag
acgatctggcctcctgcaaccgatccggggccatggttaagccgtcctatgcgtacaaaa
gttgggctgccatctcccgagcgccaaacggggattagtgcgcatgatttcctttccaag
gtcttgtcagccaaggaagttgttttttcgaatgctgcacgacgcgatggctcgccgggc
gtacctgcacgttggatggtacggttaaatgcattcttgggaggaagaggacaaaagctt
cctattcatccggcattatcttggcaacgcaagatggatcagcctttagatggggcggaa
accatctctccgcctgagccgcggccccctgtagcgttaaggccaagacggttaagtatt
acagaaattgaacggtggatgcaggatccgtatgagatatatgctaaacatattttgaaa
ttacgtgctttggaccctctggaagaaggagccgagcatgtagattttggaataattgtg
catgcagggatggaacgtatttttaagcgctatccgcatacatggcctgagaatattgat
cagaagttaaaagagattttctttgaagaattgaaaaaactgaatcttcatcctgcacga
ctaaattggtggaggccgcgtttggatcggattgcggattgggttgtccagcaagaacag
gcgcatcgtgaagagagaaagatagttcaacgctatatcgaagccagtgcttcttatatt
ttacaagcagattatgcccccttcaaattaacagggcgtgcagaccggattgatgttgca
gatgatggtttggcaaccattctggattataaaactggacaacctccgacgggggcaaag
gtagagggagggtggtctgttcagttggttttggaaggtgctcttttagctcaaggaggc
tttaaagacattccatccctttcaacgacccgtcttctctactggcacctgacgggaaat
aataaatctggagaagaaaaagaggttccaggtagtcgagcaaaacggagtgctgaagac
cttattaaggacgcgctagaaaatttgcgcagcctcgtgaatgcgtatgatgatctcaat
caagcttatcgttctcaaccatgggctcattatattccgcggtacacagattatgcgcaa
ttagcgcgtgtctatgaatggcgggcggcttatgcggaaggaaatgaaggatga
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integrated database retrieval system
