Swingsia samuiensis: E3D00_03410
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Entry
E3D00_03410 CDS
T06080
Name
(GenBank) PBP1A family penicillin-binding protein
KO
K05366
penicillin-binding protein 1A [EC:
2.4.99.28
3.4.16.4
]
Organism
ssam
Swingsia samuiensis
Pathway
ssam00550
Peptidoglycan biosynthesis
ssam01100
Metabolic pathways
ssam01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
ssam00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
E3D00_03410
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
E3D00_03410
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ssam01003
]
E3D00_03410
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ssam01011
]
E3D00_03410
Enzymes [BR:
ssam01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
E3D00_03410
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
E3D00_03410
Glycosyltransferases [BR:
ssam01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
E3D00_03410
Peptidoglycan biosynthesis and degradation proteins [BR:
ssam01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
E3D00_03410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
PCB_OB
DUF2680
Motif
Other DBs
NCBI-ProteinID:
QDH16720
UniProt:
A0A4Y6UIS0
LinkDB
All DBs
Position
complement(735234..737858)
Genome browser
AA seq
874 aa
AA seq
DB search
MTRRYSSSRNPMAPRASSPRGPRFRRFRQIIAVFAGIGLLGVTGGGVLIWATYAKFQSDL
PSIDSLRAYQPPTVSRIYTSDDQLMAQLANERRIFVPIDAIPDKVKKAFIATEDHNFYTH
GGVDVLAIARAAVTDVFARHGRRPLGASTITQQVAKVMLLNSNVLSFDRKIKEALLAEKM
EQVLSKDKILEIYLNGIYLGNGAFGVAAAAQTYFNKPIDQLDDAEAASLAALPKSPTNYN
PFLHPKMALMRRNLVLQLMAENGVITQEQAQQDKSEPLVPQKKLRFGPLPETEWFGAEVR
RQLISQYGEVKALQGGLEVHTSLEPDLQKKETRILREGLMNYDRSRSGWRGPVKHLDDVS
SVGWEQALKAVTSPAGMLREWRLAIVLPGGRQVGWLEDGVSKKGTLASSDVAWARRRAAL
RAGDIIMIEPQSTGSVMLRQIPHVEGAAITMDVRTGRVLAMVGGWSFHESQFNRTTQAMR
QPGSSFKPFVYLAAMEKGISPSEKFDDSPISYGDWHPQNYEHDNWGPTTLHDALRESRNL
VTIRVAAHLGMKAVADTAIKAGLVDQMPHVLPAALGAVETTIIKEAAAYATIANGGHIVT
PSLIDDIQDRQGNLVWQASNLTLGTAVQPAAGVAVPADQTAAPKGVAPSSPDQPQTVAPV
PADNVNVPSLLDNRPTLASEESSFQIIQMMKDVIARGTGRAAGVGIDRPIAGKTGTSQDF
HDAWFAGFSPDLVTVVWVGFDTPESLGRNADGGRIAAPIWNRIMKAAFENRPKLDFRVPD
GITLASYNTGRISAVDGFKTDQVPGASVALHGFGAGTEALTASDTGADAVISDSESEMGS
AASGSESEHSTDANGTQSQKSSASEGDIGVGGLY
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgacgttattctagttctcgtaatccaatggctcccagagcaagttctcctcgt
gggcctcgttttcgtcgttttcggcagatcattgctgtttttgcagggattggtttgctt
ggggtaactgggggaggtgtgcttatatgggccacctacgccaagttccagtctgatctg
ccaagtattgacagcttgcgtgcataccaaccaccaaccgtaagtcgtatttatacgtct
gatgatcagttgatggctcagcttgcgaatgaacgtcgtatttttgttcctattgatgcg
attccagataaagtcaaaaaagcttttatcgcaacggaagatcataatttttacacgcac
ggcggtgttgatgttctggccatcgcacgtgctgctgttactgatgtttttgcacggcac
ggccgtcgtcccttaggcgcatcgaccattactcagcaagttgccaaggtgatgttgctt
aatagtaatgttttatcgtttgatcgaaaaataaaagaagctcttttagccgaaaaaatg
gagcaggttttatcaaaagataaaatattagaaatataccttaatggaatttatttagga
aatggagcattcggagtagccgcggctgctcaaacgtattttaataaacctatagaccaa
ttagatgatgcggaagccgcttctctagccgcacttcctaaatcgcctacaaattataat
ccttttttacacccgaaaatggctttaatgcgccggaaccttgttctgcagctgatggcc
gaaaatggtgtcattactcaagagcaggctcagcaggataagagtgagcctcttgttcct
caaaagaagttacgttttgggccgttgccagaaacggagtggtttggagcagaggtgcgg
cgtcaattaatttcgcagtatggagaagttaaggcccttcaaggtggattagaggttcat
accagccttgaacctgatttacagaaaaaagaaacgcgtattttgcgcgaaggcttgatg
aactatgatcgaagtagaagtggttggcgcggcccggtaaaacaccttgatgatgtttct
tcagtaggctgggagcaggcgcttaaggctgtgacttctccagcggggatgttgcgtgaa
tggcgacttgctattgttcttcccggaggcagacaagttgggtggctggaagatggcgtt
tcaaaaaaaggaacattagcaagtagtgatgtggcttgggcgcggcgtagagcagcgctt
cgggcgggggacatcatcatgattgaaccccaaagcacaggctctgtgatgttgcgacaa
atccctcatgttgagggggcggcgattactatggatgtgcgcacaggccgtgtattggcg
atggtcggtggttggtctttccatgaaagccagtttaacagaacgacacaagctatgagg
cagcctgggtcctcttttaaaccatttgtttatctagccgcgatggaaaaggggatttca
ccgtcagagaaatttgatgactcacctatttcctatggtgattggcatcctcaaaactat
gaacacgataactggggtcccacaaccttacatgatgcgttaagagaaagtcgtaacctt
gttacgattcgtgttgcggcccacctcggaatgaaagcggttgcagataccgccattaag
gctggattagtggatcagatgccgcatgttttgccggcggctcttggtgcggttgagacg
actattattaaagaggcagcagcatacgcaaccattgcaaatggcggccatattgtaaca
ccttctctcattgatgatattcaggatcggcaagggaatttggtttggcaggcttctaac
ttaacattaggcacagccgtgcagcctgctgcgggcgttgctgtgccagcagatcagaca
gcagcgcctaaaggggtagcgccatcttctcctgatcaaccacagactgtggctcctgtg
ccggcagataatgtgaatgtaccttctcttttggataaccgtccgactttggcgagtgag
gaaagttcgttccagattattcaaatgatgaaagatgtaattgcgcgtggaacgggacgt
gcagcgggtgttgggattgatcggccgattgctggcaagacaggaaccagtcaggatttt
catgatgcatggttcgctggtttttctccagatttggtgactgtcgtttgggttggattt
gatacgccagaaagtttagggcgcaatgcagatggtgggcgaattgctgcacctatttgg
aaccgtatcatgaaggcggcctttgaaaaccgacctaagctcgatttccgagttccagac
ggtattacgttagcgtcttataatactgggcgtatatcggctgttgatgggtttaagacg
gatcaggttcctggggcatctgttgcattgcatgggtttggggctggaacagaagctctg
acagcatctgatacgggagcagacgctgtaatttctgattctgagagtgagatgggaagt
gctgcatcaggatcagagagtgaacactctactgatgctaatggaacacaatctcagaaa
agtagtgcatcagagggtgacatcggtgtaggtgggctgtactga
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