Swingsia samuiensis: E3D00_03425
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Entry
E3D00_03425 CDS
T06080
Name
(GenBank) mechanosensitive ion channel
KO
K22044
moderate conductance mechanosensitive channel
Organism
ssam
Swingsia samuiensis
Brite
KEGG Orthology (KO) [BR:
ssam00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssam02000
]
E3D00_03425
Transporters [BR:
ssam02000
]
Other transporters
Pores ion channels [TC:
1
]
E3D00_03425
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Gene cluster
GFIT
Motif
Pfam:
MS_channel_2nd
MS_channel_1st
Motif
Other DBs
NCBI-ProteinID:
QDH16723
UniProt:
A0A4Y6UGP5
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Position
739876..742275
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AA seq
799 aa
AA seq
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MINTKYKKISSLDFGGVLKKSIHIVLLIILLGVVGFSVNTALADSTSSLDTPLTKQEAQK
LLTILNDPKEREAFSHTLSLMARAAPSNNHTALKNKTDIHNGLESLHAQSLSYFHNFLGL
FIDLRFLMYEIHDQFSSQNARKIIYTTTLLSIIFVALGLGIEHLTTFILKNPIQRISLRV
DEKEKTHDRYIQKKEEQNSPPPSPEDISDKTTATRTTDQKRRVETLRFLARVPYAFILFL
LKIFPVGVFFLLVTLSTLLFPFLSDSKAGSIIMTLASCYAGARCLYFAIETIFSPHNPNI
RLIPTTNLIAARFTRWLGCLILAPTLIICFINLNTQLNISSRALDALIRAIVLIEHILIA
LFIWRMRHVVSNALTPTAAGKSKKLWSFFATIAKAWWIPAMFIDISLWIVWAAHLSGGYH
WILTTTGITVAILIVSRIVAVLAYGLQDRFFRLNPALNERFPDLQKRADHYYPLAHATLT
GIIVFLTIISIVEAWGFPIFGFFLKNSLGQHISNTGVITIVSIIIAILIWETINIILINQ
INHFQNAGFSSRATRLKTILPIIRTVFLIIIIVTVIVTILAQIGINITPLLTGAGIMGAA
IAFGSQSLVKDFITGFFMLVEDAIQVGDWVTTGGVSGIVENLSIRTVKIRDTDGDLHIIP
FSSVTSIANTARGYNKIIIKQQLDLSEDFSRVVSIMTKVVKDMRADDVFGPLILSDYNDL
GVDKTDSSGATLRGEIWTTPMMKWKVQREFYKRIANLFAAEKIKFYTGTSYFTTPPGSPM
QVKSIQIANDVTPTTPQDS
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atgataaatacaaaatataaaaagatatcttcactcgactttggaggcgttcttaagaaa
tcaatccatatagttcttcttattatattactaggtgtggtaggattttctgttaatacg
gctttagcagattcaacatcttcccttgatactccgcttactaaacaggaagcccaaaag
cttcttaccattcttaatgaccccaaagaacgagaagctttttctcatactctctcttta
atggcgcgcgctgctccctcgaacaatcataccgcattaaaaaacaaaacagatatccat
aatggtctagagagcttacatgctcagtctttaagttatttccataatttcttgggtcta
tttatcgatctaagatttttgatgtatgaaatacacgatcaattcagcagtcaaaatgcc
cgaaaaattatttatactacaacactactctctatcatatttgttgcactcggattaggg
attgaacacctcaccacttttattttgaaaaacccgatccaacgtatttctctgcgggtc
gatgaaaaagaaaaaacacacgatcgatatattcaaaaaaaagaagagcaaaactctcca
ccaccttcccctgaggacatttctgataaaacaacagctacacgcacaacagatcaaaaa
aggcgcgtagagactttacggttccttgcgcgtgttccttatgcattcatcctttttctt
ctcaaaatatttcctgtaggcgtttttttcttacttgttacattatctactcttcttttt
ccctttctatcagactcaaaagccggttccattattatgacactagccagttgctatgct
ggtgcacggtgtttatattttgctattgaaacgatcttttcgcctcacaaccctaatatt
agacttatccctacgacaaaccttattgcagcacgttttacgcgatggctgggctgcctt
atcctcgcccctacccttattatttgttttataaatttaaatactcaactgaatatatcc
tcccgtgctttagatgcacttattcgggcgatcgtccttattgaacatattcttatcgct
ctcttcatttggcgcatgcggcacgttgtaagtaacgcgttaacgcctactgctgcaggt
aaatctaaaaaattatggtccttttttgccaccattgccaaagcatggtggataccggcc
atgtttatcgacatctctttatggattgtctgggcagcgcacttatctgggggatatcac
tggattctaacaacgacaggcattacggtcgctattcttatcgtttcacgtatcgtagcc
gtgctcgcatacggtctacaagaccgctttttccgactcaatccagctctaaacgaacgt
ttcccagaccttcaaaaaagagctgaccattattaccctcttgcacatgcaacactaact
ggaattattgtctttctaaccattatatccattgttgaggcatggggcttcccaatattt
ggctttttcttaaagaactcacttggtcaacatatttcaaataccggggtcattacaatc
gtatccattattatagctatattaatatgggaaactatcaacattattttaataaaccaa
attaatcacttccagaatgctggttttagttctcgtgcaacacgcctcaaaacaatcctc
cctattatccggactgtttttctcatcatcattatcgtgactgttatcgtaaccatctta
gctcaaatcggcatcaatattactcccctccttactggtgcaggaattatgggagccgct
attgcttttggttcacaaagccttgttaaagactttatcacaggctttttcatgcttgtt
gaagatgccatacaagtgggcgattgggtaacgaccggaggggtatcaggtattgttgaa
aacctttcgatccgtactgtcaaaataagagatacagatggtgaccttcacattatccca
ttttcttcagtcacttccattgcgaatacagcccgcggctataataaaatcatcatcaaa
caacagctggatctttcagaagactttagccgtgtcgtttctattatgacaaaagttgta
aaagatatgcgcgccgacgatgttttcggtcctctgatcttgtcagattataatgatctt
ggagttgataaaaccgatagcagcggcgcaacattacgcggtgagatatggacaaccccc
atgatgaaatggaaggttcaaagagagttctacaaaagaattgctaatctattcgctgcc
gagaaaattaaattttacaccggaacgtcttatttcacgacaccacccggaagcccgatg
caagtcaaatcaattcaaatcgcgaatgatgtaacaccaactacaccacaagattcgtaa
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