KEGG   Swingsia samuiensis: E3D00_03435
Entry
E3D00_03435       CDS       T06080                                 
Name
(GenBank) peptidase domain-containing ABC transporter
  KO
K13409  ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
Organism
ssam  Swingsia samuiensis
Pathway
ssam02010  ABC transporters
Brite
KEGG Orthology (KO) [BR:ssam00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    E3D00_03435
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:ssam01002]
    E3D00_03435
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:ssam02000]
    E3D00_03435
   02044 Secretion system [BR:ssam02044]
    E3D00_03435
Peptidases and inhibitors [BR:ssam01002]
 Cysteine peptidases
  Family C39
   E3D00_03435
Transporters [BR:ssam02000]
 ABC transporters, eukaryotic type
  ABCB (MDR/TAP) subfamily
   ABCB-BAC subgroup
    E3D00_03435
Secretion system [BR:ssam02044]
 Type I secretion system
  RaxAB-RaxC type I secretion system protein
   E3D00_03435
SSDB
Motif
Pfam: Peptidase_C39 ABC_tran ABC_membrane SMC_N AAA_22 AAA_16 Mg_chelatase AAA_29 SbcC_Walker_B AAA AAA_21 ORC-CDC6-like DO-GTPase2 MobB AAA_14 AAA_33 AAA_5 NACHT AAA_23 AAA_25 AAA_18 Peptidase_C39_2 DLIC AAA_28 RNA_helicase T2SSE RsgA_GTPase AAA_24 Rad17 ATPase_2 AAA_19 AAA_7 PduV-EutP MMR_HSR1 PRK nSTAND3 AAA_30 NB-ARC
Other DBs
NCBI-ProteinID: QDH16725
UniProt: A0A4Y6UL12
LinkDB
Position
743736..745862
AA seq 708 aa
MLRDLQFGFGKRTPVILQSESSECGMACLAMSMGYYGHFIDISTFRRQYGASTQGATLKE
LISVSSRVGLNSRAVRLELDELDKLTLPSILHWGLNHFVVLVERRSKSVIVHDPAIGRRE
IGLKELSREFTGIALEITPTERFERKDERKTLTLRDMFRHVSGLKPALAYLFALSLGLEL
IALAMPMVSQVIIDEVIVIGDHDLLVTIACSMAILLLFQLFISTVRSWAVIMFSTRVSLK
WNGSLFDHLTRLPLDYFIRRHIGDVISRFGSLGSIQRTITTDLVQTILDGIMAIGMGVML
FLYGGWLGAIACIAIALDVLLRLVTYGTYKRASEEGVIQDAKSQTYFIETLRNIATVKLL
NLRERRQTVWLNSVIDSMNIHLRLQRFDLIFGRLGDLIFSSDRLIMLVLGAKMVMNNHMS
VGMLVAFLSYKDQFASRVGNLINTGFKLRMLSIQTGRLSDIVMTEPEEPGLPLPPPSPQE
MGHTGAITVRDLSVRYSPESPWIFRNLSFNIPAGKNIAIVGPSGCGKTTLLKTLMGLLEP
TEGDIALDNISIKSLTLDGYRSRIAGVLQDDGLFSGSLSDNISGFAEHINQPLVEACAQY
AAIHDDIQRLPMRYETLVGDMGSNLSGGQKQRVILARALYRSPQILFLDEATSNLDEATE
ARVAQALRMLNITRVIVAHRPATIAHADVILHMTPQGLQIETRNMEKS
NT seq 2127 nt   +upstreamnt  +downstreamnt
atgcttcgcgaccttcaattcggctttggaaaacgcactcctgttattttgcaatcagaa
tcttctgaatgtggaatggcatgccttgccatgtctatgggctattatggtcattttatt
gatatttctacgtttcgccgtcaatacggtgcatcaacacaaggcgccacccttaaagaa
ctcatctccgtttcaagtcgtgtggggctcaactcacgcgctgtaaggctagagttggat
gaacttgataaactaacgctacccagtattctccattggggccttaatcactttgtcgtt
ctggttgaacgccgctccaagagtgtgatcgtccacgatcctgctattggccgtcgcgaa
atcggtttgaaagaactttcccgcgaatttacagggattgcactcgaaattacgccaaca
gaacggtttgaacgtaaagacgaacgtaaaaccttaacattacgtgacatgtttcgtcat
gtctcaggcctaaagcccgctcttgcttatcttttcgctctttctttagggcttgaactt
attgcattagcgatgcccatggtgagccaagttattattgatgaagtgattgttattggt
gaccatgatcttttagtcacgatcgcctgtagtatggccattctattactattccagctt
ttcatttccactgtgagaagctgggctgtcattatgtttagtacccgtgtctctttaaaa
tggaatggttctctctttgaccatctaacacgccttcctcttgattactttattcgtcgt
catattggggacgttatttctcgttttgggtctcttgggagcatccaacgtactattaca
acagacctcgtccaaactattctagatggtattatggccatcggaatgggagtaatgttg
tttttatacggtggatggctaggagccattgcctgtattgcaatcgcacttgacgtcctt
ttacgtctggtcacatacggtacctacaagcgagcctctgaagaaggggttattcaagat
gcgaaaagtcaaacctatttcatagaaacgctacgcaatattgctaccgtaaaacttctt
aatttacgtgaacgccggcaaactgtttggctaaacagtgtcattgattcaatgaatatt
catttacgcctccaaagatttgacctcattttcgggcgccttggggatctaatttttagt
tcagaccgactaattatgctcgttcttggcgcaaaaatggtcatgaacaaccatatgtcc
gttggtatgctcgtggctttcctctcttataaagatcagtttgctagccgtgttggaaat
ttaattaatacaggcttcaaacttaggatgttaagcattcaaacgggccgtttatcagat
attgttatgaccgaacccgaagagccaggccttcctcttcctccgccatcccctcaagaa
atgggacatacaggcgccatcacggtaagagatctttctgtgcgttatagccctgaaagc
ccttggatttttcgtaatctttctttcaatattccagccggaaaaaatattgccatcgtt
ggcccttcaggctgcggcaaaacgacacttctcaaaactcttatgggattacttgaaccc
acagaaggcgatattgccttagataatatttccattaagtcacttacacttgacggctac
cgctcccgtattgctggggtattacaagatgatggacttttttcagggtctttatctgat
aatatcagcgggtttgccgaacatatcaaccaaccgcttgtggaggcatgcgcacaatat
gctgccatccatgacgatattcagcgcctccccatgcgttatgaaacactcgttggcgat
atgggctccaatctttcaggagggcaaaagcaacgcgttattcttgctcgtgctctttat
cgttcaccgcaaatcctatttttagatgaagcaaccagcaatctagatgaagcgacagaa
gcacgcgttgcacaagccttaagaatgctaaacatcacccgtgttattgttgcacaccgc
cctgccaccatcgctcacgcagatgttatattacacatgacccctcaagggttacaaatt
gaaacacgcaatatggagaaatcctaa

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