Swingsia samuiensis: E3D00_05970
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Entry
E3D00_05970 CDS
T06080
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
ssam
Swingsia samuiensis
Pathway
ssam02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ssam00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
E3D00_05970
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssam02000
]
E3D00_05970
Transporters [BR:
ssam02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
E3D00_05970
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GFIT
Motif
Pfam:
ABC_tran
TOBE_2
Motif
Other DBs
NCBI-ProteinID:
QDH17161
UniProt:
A0A4Y6UL92
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All DBs
Position
complement(1294977..1296125)
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AA seq
382 aa
AA seq
DB search
MSLSPNTSLYALNKKRLRAERTPPSLKIEGLRLTVESVPFDLTLTKGEILTAFGTTPFVL
STFLEQLAGFAPLIDGKIFLHDEDVSSLPLGKRKIGLINQHTPLFPHMNVHENIAFAFQA
TGQNKSEAFDAANRMLSLVGLDGHGHAHTKSLSSEETLRTLLARALACSPKLLLIDDPYF
SLPLHTTRQFTSLLIKLSRALDLTIVQTTSHREDALRAGGKIAFFNHEALLQHDTAAVLY
DRPAAIEIATIFGEANALTGQILGIGDDIASIQLACGGVVEAFVSSERLHKGDECIVCIR
PDQISPFFGSRPLNFDEDTSSPVNGVLIESIHLGDHIKMRVRTPDGTEIDLHRPPIQSQQ
IPSNGSSVQLAWMAGNATAFPP
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgtctctctcacctaacacatccctctatgcccttaataaaaaacgtcttcgggcagaa
agaacacccccctctctaaagattgaaggtcttcgcctcactgtagaaagcgtccccttt
gatttaacccttacaaaaggtgaaatccttacagcatttgggacgacaccttttgtttta
tcaacttttcttgaacagttggccggatttgcacctcttattgacgggaaaatatttctt
cacgatgaggatgtctcctctctcccgctagggaaaagaaaaatcggccttataaatcaa
cacactcccctattcccacatatgaatgttcatgaaaacattgcttttgcttttcaggcg
acgggacaaaataaatctgaagcattcgatgctgccaaccgaatgttatctcttgtaggc
ttagatggacacggccacgcacatacaaaatctctctcttcagaagagacacttcgtacc
ctcttagcccgcgcgcttgcgtgttctcctaaacttcttctcattgacgacccttatttt
tctttacccttacacaccacgcgccaattcacctctctccttataaagctttcccgtgcg
cttgacctcaccatcgtacaaacaacgtctcaccgagaagatgcgctaagagcgggaggg
aaaattgccttcttcaaccatgaagctcttctccaacatgatacggcggcagttttgtat
gaccgcccagcggctattgaaatcgcaacaatttttggagaagcaaacgctctcacaggg
caaatattgggtattggggatgatattgcctcaatccagcttgcttgtggtggagtagtt
gaagcttttgtatcatccgaacgtttacataaaggcgatgaatgcatcgtatgtattcgc
cctgatcaaatatcacctttctttggatcaaggccccttaactttgacgaagacacatct
tctccagtaaatggggttttgatagagagtatccatttaggagatcatattaaaatgcga
gtacgtactcctgacggtacggaaattgacttacaccgccctcccattcaatcacagcag
atcccttcaaacggctcttctgttcaattagcatggatggctggtaatgcgactgctttt
ccgccataa
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