Swingsia samuiensis: E3D00_06340
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Entry
E3D00_06340 CDS
T06080
Symbol
clpB
Name
(GenBank) ATP-dependent chaperone ClpB
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
ssam
Swingsia samuiensis
Brite
KEGG Orthology (KO) [BR:
ssam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
ssam03110
]
E3D00_06340 (clpB)
Chaperones and folding catalysts [BR:
ssam03110
]
Heat shock proteins
HSP100
E3D00_06340 (clpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
AAA
AAA_5
Clp_N
AAA_16
AAA_22
nSTAND3
Sigma54_activat
AAA_7
Mg_chelatase
AAA_24
IstB_IS21
bpMoxR
AAA_14
TniB
AAA_25
NACHT
DNA_pol3_delta2
T2SSE
NBD_SMAX1
Motif
Other DBs
NCBI-ProteinID:
QDH17222
UniProt:
A0A4Y6UI87
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All DBs
Position
1364626..1367229
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AA seq
867 aa
AA seq
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MDIQKFTERSQGFIQAAQTIALRDYHQQLTPEHLLKALLDDDQGAASGLIKAAGGDPKAV
QAANDAALARLPKVQGGGAGQPQATPDFIRLLDSAESAAKMAGDSHVAQDRLLIAIAASQ
TPAGKALVDGGASATALEKAVTQIRKGRTVTSASAENTFDALKKYARDVTAVALEGKLDP
VIGRDEEIRRAIQVLARRSKNNPVLIGEPGVGKTAIVEGLALRIVNGDVPEALRNKQLMS
LDMGALIAGAKYRGEFEERLKAVLKEIETAEGQIILFIDEMHTLVGAGRSDGAMDASNLI
KPELARGTLHCIGATTLDEYRKYIEKDAALARRFQPVFVGEPTVADTISILRGIKEKYEL
HHGVRITDNALVAAATLSNRYITDRFLPDKAIDLIDEAASRLRMQIDSKPEALDELDRRI
IQLKIEREAIRKEDDNASKERLVTLEQELTKLEEESNALAAAWHAEKDRVNAVQKLQEQL
DTARSEVEVAQRQGNLGKASELMYGVIPNLEAEIAKAQQEEETAASKSGLFADSVTDQGI
AAVVSRWTGVPVDRMLEGERAKLVRMEDVLRERVVGQEMALVAVANAVRRARAGLQDPNR
PIGSFLFLGPTGVGKTELAKSLAQFLFDDEHALLRIDMSEFMEKHAVSRLIGAPPGYVGY
DEGGVLTEAVRRRPYQVILFDEVEKAHEDIFNILLQVLDDGRLTDGQGRVVDFRNTIIVL
TSNLGSEVLANQAEGESPDLVQAQVMQVVRNHFRPEFLNRLDEIILFSRLQRVDMGRIVD
IQLGRLRKLLEDRKIKLNLDEKGTEWLAESGYDPVYGARPLKRVIQRSLQNPLAGLLLNG
DVHDGDTVHVSADEKGLTIDGTPVLLT
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atggatattcaaaaatttactgaacgtagccaaggttttattcaggctgctcaaactatt
gcactgcgggattatcatcagcagttaacgccagagcatcttttgaaggctcttcttgat
gatgatcagggggcggcatctgggttgattaaagctgcgggtggagacccgaaagctgtg
caagctgctaacgatgcagcattagcaagactcccaaaagtacaaggtgggggtgcagga
caaccccaagccacccctgattttatacggctactagactcagcagaatctgcggctaaa
atggctggagatagccacgtagcgcaagatcgtcttttaatcgcgattgccgcaagccaa
acaccagccggaaaagcactggtggatggtggtgcgagtgctacggcattggagaaagct
gtaacacagattcgtaaaggccgtacggttacaagtgcatccgcggaaaatacgtttgat
gcattaaagaaatatgcccgtgatgtgacagccgttgcacttgaaggtaagcttgatccg
gttattgggcgtgatgaagagatccgccgtgcgattcaggttttggcgcgccgcagcaaa
aacaatcctgtgcttattggtgagccgggtgttggtaaaacagcaattgtagaaggcctt
gcccttcgcatagtgaacggagacgtgccagaagctctgcggaataagcagcttatgtct
ttggatatgggcgcattaattgcaggtgcaaaatatcgtggtgagtttgaagagcgtctg
aaagctgttcttaaggaaattgagacggctgaaggccaaattattctctttattgacgag
atgcatactttggtaggtgcgggtcgatcagatggtgcgatggacgcatcgaatttgatt
aaacctgaacttgcccgtggaacgctgcattgtattggtgcgacgacacttgatgaatac
cggaagtacattgaaaaagacgctgcattagcacgtcgttttcagcctgtatttgttgga
gagccaacggttgctgatacgatctctattttgcgtggcattaaagagaagtatgagttg
caccacggcgttcgtattacagataatgcattggttgcagcggcaacgttgtcaaatcga
tatattacggatcgtttcttgccagataaagcaatcgatttgattgatgaggccgccagt
cgtctgcggatgcagattgatagtaagccggaagctttggatgagttggatcgtcgtatc
atccagcttaagattgagcgtgaggcaattcgtaaagaagatgataatgcttcgaaagaa
cgcttggttactcttgagcaagaactgacaaagcttgaagaagaatccaacgcgcttgca
gcagcatggcatgctgagaaagatcgggttaatgccgttcagaagcttcaggaacagttg
gatacagctcgttcagaagttgaggttgcacagcgacaaggtaatttgggtaaagcatct
gagctaatgtatggggttattcccaatttagaggcagaaatagccaaggcccaacaagaa
gaggaaacggctgcttctaagagtggcttgttcgctgatagtgttacagatcaagggatt
gctgcggttgtctctcgatggactggtgttcctgttgacaggatgctggaaggtgagcgc
gcaaagcttgtgcgcatggaagatgtgctgcgcgaacgtgtcgtcgggcaagaaatggcg
ttggtagcagttgcaaatgctgttcggcgtgcgcgtgctggcttgcaggatcctaaccgt
cccattggttcattcttgtttttggggccaacaggggttggtaagaccgagcttgctaag
tccttagctcagttcttgtttgatgatgagcatgcgttgcttcggatcgacatgagcgag
ttcatggaaaagcatgcagtttctcgtcttatcggagcgcctccgggatatgttggttat
gatgaaggtggtgttctaacggaagctgttcgtcgccgtccgtatcaggttattctgttc
gatgaggttgagaaagcgcatgaagatatctttaatatcttgttgcaagttcttgatgat
ggtcgtttgacggatgggcaagggcgtgttgtcgatttccgtaataccattatcgttctg
accagtaacttggggtctgaggttttagcgaatcaagctgaaggcgaatcacctgatttg
gttcaggcacaggttatgcaagtcgttcgtaatcatttccgtcctgagttcttgaaccgt
ttggatgagattatattgttctcacggttacagcgcgttgatatgggccggattgttgat
attcagcttggacgtttaaggaagttgttggaagaccgtaaaatcaaactgaaccttgat
gaaaaaggaacagaatggttggcagaatccggctatgacccagtttatggtgcgcgtcct
ttgaagcgtgtcatacaacgaagccttcaaaacccattagcaggacttttattaaatgga
gacgtgcatgatggggatacagttcatgtgtcagcggacgagaagggtctaaccattgat
gggacgccagttttgctgacctaa
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