Swingsia samuiensis: E3D00_07650
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Entry
E3D00_07650 CDS
T06080
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
ssam
Swingsia samuiensis
Pathway
ssam03030
DNA replication
ssam03410
Base excision repair
ssam03420
Nucleotide excision repair
ssam03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ssam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
E3D00_07650 (polA)
03410 Base excision repair
E3D00_07650 (polA)
03420 Nucleotide excision repair
E3D00_07650 (polA)
03440 Homologous recombination
E3D00_07650 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssam03032
]
E3D00_07650 (polA)
03400 DNA repair and recombination proteins [BR:
ssam03400
]
E3D00_07650 (polA)
Enzymes [BR:
ssam01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
E3D00_07650 (polA)
DNA replication proteins [BR:
ssam03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
E3D00_07650 (polA)
DNA repair and recombination proteins [BR:
ssam03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
E3D00_07650 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
E3D00_07650 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
HHH_5
HHH_2
Motif
Other DBs
NCBI-ProteinID:
QDH18045
UniProt:
A0A4Y6UPT6
LinkDB
All DBs
Position
1607519..1610293
Genome browser
AA seq
924 aa
AA seq
DB search
MPSETPHLVLVDGSGFIFRAFHALPPMTSPDGVPVNAVYGFTNMLMRLLRDRVGTHLAVI
FDAGRQTFRNDIYPQYKAHRPEPPEELRPQFSLIRDATAAFNVASIESPGWEADDLIASY
AKDVVEKGGRCTIVSSDKDLMQLIRPGVELLDPMKQKPIREAEVEAKFGVKPEKVVDVQA
LMGDSTDNVPGVPGIGPKGAAQLVQEYGSLEDILSAAPSMKTSKRKQNLIEYADAARMSY
KLVLLADHVPLPQTLEDLSYREPDKDVLGSWLEKMGFFSTIQRMGLGAVAQAKGKTSSPA
VSVTSEDADQGQVQLSEAPYGPYETVTTFEALDQWIAAAFKVGIVAVDTETDSLNARQAN
MVGLSLSTEAGKACYVPFLHEGTLDQPTGHQLDRAEVLQRLEPLFEAESVLKIFQNAKYD
LTVFRKAGVKRITPIDDTMLISYAQSAGEHGQGLDELSELHLGHTPIKYDEVTGTGRKRI
PFAQVPLERATEYAAEDADVTLRLWQVLRPQLRVRKSLALYEELERPLIQVLTDMEDVGI
KVDATELRRMSADFAQRMEEIEGNIHAEVGRSFNVGSPKQLGEILFDEMQLPGGKRTKSG
SWGTDSSVLEQLAEQGHELPQKILSWRQLAKLKSTYADALVQQMDQGTERVHTSFQMAVT
TTGRLSSNEPNLQNIPIRTEEGGRIRKAFVAAPGCVLVSADYSQIELRLLAHVAKIEPLL
EAFRLGQDIHARTASEVFGIPLEGMDALTRRRAKAINFGIIYGISAYGLARQLQISPGEA
RSYIDAYFARYPGIRDYMERTKEEAKEHGYVLTPFGRRCYVPGIRDKNGARRSYAERQAI
NAPLQGGAADIIKRAMVRLSHSLPKTDLEAQMLLQVHDELLFEVKEKDAEMLSSFVKKEM
EAAAHLDVELKVETGIGSSWADAH
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
gtgccgtctgaaacaccgcatttggttttagttgatgggtctggttttatattcagagct
tttcatgctttgcctcccatgactagcccagatggtgttccagtgaatgccgtatatggt
tttacgaatatgttaatgcgtctgttgcgtgatcgcgttgggacgcatttagccgttatt
tttgatgcaggccggcagacgtttaggaatgatatttatcctcaatataaggcgcatcgt
cctgaaccaccagaggagttgcgcccacaatttagtttaatacgggatgccacggcggca
tttaatgttgcctcgattgaaagccccggttgggaagccgatgatttaattgcgagttat
gcaaaagacgtagtggaaaagggtggccgctgtacgattgtttcatcagataaggattta
atgcagcttattcgaccgggtgtagagttgcttgacccaatgaagcaaaagcccattcgt
gaagctgaagtcgaggctaagtttggtgttaagcctgagaaggttgtcgacgttcaggct
cttatgggagattccacggataatgttccgggtgttccgggaattggccccaaaggtgca
gctcagcttgtgcaagaatatggcagtttagaagatattctgagtgcagcaccaagcatg
aaaacatctaaaagaaagcaaaaccttatcgagtacgcagatgctgcgcgtatgtcttat
aagttggttttgttggcagaccatgttcctcttcctcaaacattggaggacctgtcttat
cgtgagcctgataaggatgttttgggcagttggttagaaaagatgggctttttctccacc
attcagcgtatggggctaggggccgttgcgcaagcaaaaggcaaaacatcttctcctgct
gtttcggtcacatcagaagatgcagaccaaggacaggtacaactttccgaagcgccttat
gggccgtatgagacagttacaacttttgaggctttggatcagtggattgccgcagcgttt
aaagttggaattgttgcagttgatacggaaacagatagcttaaatgcccgtcaggcgaac
atggtcggtctatctttgtctaccgaggcggggaaggcgtgttatgtccccttccttcat
gaaggaacgttggaccaaccaacggggcatcaattggatcgggcagaagtgcttcagcgg
ctagaacctctttttgaggctgaaagtgtgttgaagatctttcaaaatgcgaaatacgac
cttacggtttttagaaaagccggggtaaaaagaatcactcctatagatgatacaatgctg
atctcatatgcgcagtcagcaggagaacatgggcaaggcctggatgagctgtcagagctt
catcttgggcatacgcccattaaatatgatgaggtgacgggaacgggacgtaagcgtatt
ccttttgcgcaagtgccgttagagcgtgctacggaatatgccgctgaggatgctgatgtc
acattgcgtttatggcaggttctgcgccctcaattgcgtgttagaaaatcactcgcctta
tatgaagagcttgaacggcctttaattcaggttctgaccgatatggaagatgttggtatt
aaagtcgatgcgacggagctgcgccgtatgtcagcagactttgcacaacgcatggaagag
attgaagggaatattcacgccgaggttgggaggagttttaacgtagggtctcccaaacag
cttggtgaaattctgtttgatgagatgcagcttcccggcggcaagagaaccaaaagtggt
tcttggggaacggattcctccgtgttggagcaattggcggagcaaggccatgagctacca
cagaaaattctgtcttggcggcagttggccaagctgaaatcaacatatgctgatgcgctg
gttcagcagatggaccaagggacggaacgtgttcatacgtcgttccaaatggcggttaca
acgacggggcgtctatcttccaatgagccgaatttgcagaatattccgatccgcacagaa
gaaggcgggcgtattagaaaggcttttgtggctgccccagggtgcgttttagtttctgct
gattacagccagattgaattacgcctgttagcgcatgtcgcaaaaattgaacctctttta
gaagcatttcgattagggcaagacattcacgcacgaaccgcatccgaagtgtttggtatt
cccttggaagggatggatgctttaaccagacgccgggctaaggctattaattttggtatt
atttatggcatttcagcctatggcttagcgcgtcagcttcagatatctcccggggaggcg
cgttcttatattgatgcttattttgcacgttatcccggtattcgggattatatggaacgg
acaaaagaagaagcgaaagagcatggatatgttctaaccccatttgggcggcgttgttat
gtcccggggattagagacaaaaatggtgcgcgcagaagctatgcagagcgccaagcaatt
aatgcacctctgcaaggaggtgcggctgatatcattaaacgtgccatggtgcgtctgtcg
cactcgttaccgaaaacagatttagaagcacaaatgctcttgcaagtgcatgatgaactt
ctttttgaagtgaaagagaaagatgcagaaatgctttcttcctttgttaagaaagagatg
gaagcggctgctcatttggatgttgagctgaaagttgaaaccggtattggttcaagctgg
gcagacgcgcattaa
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