Swingsia samuiensis: E3D00_07815
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Entry
E3D00_07815 CDS
T06080
Symbol
serS
Name
(GenBank) serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
ssam
Swingsia samuiensis
Pathway
ssam00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ssam00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
E3D00_07815 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ssam01007
]
E3D00_07815 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ssam03016
]
E3D00_07815 (serS)
Enzymes [BR:
ssam01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
E3D00_07815 (serS)
Amino acid related enzymes [BR:
ssam01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
E3D00_07815 (serS)
Transfer RNA biogenesis [BR:
ssam03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
E3D00_07815 (serS)
Prokaryotic type
E3D00_07815 (serS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
ERM_helical
Motif
Other DBs
NCBI-ProteinID:
QDH17477
UniProt:
A0A4Y6UMA1
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All DBs
Position
1645603..1646865
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AA seq
420 aa
AA seq
DB search
MHDLKALRADPTAFDAALERRGLAPVGHKLVTDDEERRAALAALQDAQGARKVLAKEIGQ
GKKSGEDTSDLEARAVELRDEITRLEVHASTIEKNINDILMSLPNRLDPSVPDGKSEEDN
VIVHYRGEKRDFPFAPKQHFELGEALGLMDFPTAAKLSGTRFVVLRGALARLERALGQFM
LDTHTSEFGYHETSVPLLVNDEAMYGTDKLPKFAEDSFRTEDGRWLIPTAEVPLTATVMG
EILPEKALPIRLTALSQCFRSEAGSAGRDVRGMLRQHQFTKCELVSIVAPEESEAEHERM
THAAETILERLGIAFRRVLLCAGDTGFGAAKTFDLEAWLPGQQAWREISSCSNTRDFQAR
RMKARYRSENGPAFVNTLNGSGLAVGRTLIALMETYQNEDGSIDVPEVLQPYMGHIKKIS
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgcacgatttaaaagctttacgcgccgatccaacggcatttgatgcggctttagagcgt
agaggccttgcccctgtcggccacaagctcgttacggatgatgaagaacgccgtgctgct
ttagctgccttgcaggatgctcaaggtgcacgtaaggttttggctaaagagattggacaa
gggaaaaaatctggggaagatacctccgatcttgaggcgcgtgctgttgagcttcgtgat
gaaattacacgtttggaagttcatgcatcgacgattgaaaaaaatattaatgatatactg
atgtcacttcctaatcggttagatccttctgtaccggacgggaaaagtgaagaagataat
gtgattgtgcattatcggggggaaaaaagagattttcctttcgcaccgaaacaacatttt
gagctgggagaggcgctgggattgatggatttcccaacggctgccaaattatctggtact
cggtttgttgttttgcgtggtgccttagcgcgcttggagcgtgctttagggcagtttatg
cttgatacacatacgtctgaatttggatatcatgagacaagtgttcctctgcttgttaat
gacgaggcaatgtatggaacggataagctcccaaaatttgcagaggattcatttagaaca
gaagatgggcgttggttaattcctacagcagaagttccgttaacggccactgtgatgggc
gagattttgcctgaaaaagcattgccaattcgtttaacagctttatctcagtgttttcgt
tcagaggctggatcggctgggcgagatgtccgtggtatgttgcgtcagcatcaatttacg
aaatgtgagctggtttctattgttgctccagaagagagcgaagctgagcatgaacggatg
acccatgccgcagaaactattttggagcgcctagggattgcctttcgccgtgtcttgtta
tgcgctggagatacagggtttggggctgcaaagacctttgatttagaggcttggctaccc
gggcagcaggcgtggagagagatttcctcatgctctaatacgcgagatttccaagcgcgt
cgtatgaaagcacgttatcgctcagaaaatggtcctgcttttgtgaatacattaaatggt
tctggcttagctgttgggcggacgctcattgcgttgatggaaacgtaccaaaatgaggac
ggcagcattgatgtgccagaggttttacaaccctatatggggcatattaagaaaatatct
taa
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