Swingsia samuiensis: E3D00_07950
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Entry
E3D00_07950 CDS
T06080
Name
(GenBank) OmpA family protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
ssam
Swingsia samuiensis
Brite
KEGG Orthology (KO) [BR:
ssam00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssam02000
]
E3D00_07950
Transporters [BR:
ssam02000
]
Other transporters
Pores ion channels [TC:
1
]
E3D00_07950
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
Surface_Ag_2
DEC-1_N
Motif
Other DBs
NCBI-ProteinID:
QDH17501
UniProt:
A0A4Y6UM78
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All DBs
Position
complement(1675863..1677002)
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AA seq
379 aa
AA seq
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MRLRTALLAMTAMATAPSLAVAGTITGPYVNIGGGYNLVQTQHGRFSPTTQADGSESNSQ
TKSRYRHKNGFTGFGAAGWGFGNGLRAEVEGVYNYSEINHRRGTAVTGRTSGSDQAYGGF
VNVLYDIDLARFGINAPVTPFVGVGAGYLWQHYNPITTSYSNGNVNRVGGTQGSFAYQGI
VGAAYDIPHVPGLAVTTEYRFVGQTFADGPYQSTAWNRTGVHKGNVNFDHRFSHQFILGL
RYAFDTAPPPPPPTPVMATPAPTVARTYLVFFDWDRANLTGRAREIVAQTAQASTHVQTT
RIEVDGYTDNSAAHPGARGQRYNMGLSIRRAQSVKAELIRDGVPAAAIDIHGYGEAKPLV
ATGPNTREPQNRRVEIILK
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctccgcaccgcactacttgctatgacagcgatggcgacagctccatcacttgct
gtagctggcacgattacaggcccatacgtcaacattggcggtggttataacttggtccag
acacagcacggacgtttctctccaaccacacaagctgatggttcagagagcaacagccag
accaagtctcgttaccgccacaaaaacggcttcactggcttcggtgctgctggttggggt
ttcggcaacggtcttcgtgctgaagttgaaggtgtttacaactattcagaaatcaaccac
cgtcgtggtacagctgtaacaggtcgcacaagcggttctgaccaagcttatggtggtttc
gtcaacgttctttatgacattgacctagctcgctttggtatcaatgctcctgtaacacct
ttcgttggtgttggtgctggttacctatggcagcattataacccaatcaccacaagctac
agcaacggtaacgtaaaccgcgttggtggtacacaaggtagctttgcttaccaaggtatc
gtgggtgcagcttatgatatcccacacgttcctggtcttgctgtaacaactgaatatcgc
ttcgttggtcaaacctttgctgatggtccatatcaatccacagcttggaaccgtacaggt
gttcacaaaggtaacgtgaactttgatcaccgcttctcgcaccagttcattcttggtctg
cgttatgcgtttgatacagcaccaccaccaccaccaccaacacctgttatggcaacacct
gcgccaacagttgctcgtacataccttgtcttctttgactgggacagagcaaacctaaca
ggtcgtgcacgtgagatcgttgctcaaacagctcaagcttctacgcacgttcaaacaaca
cgcatcgaagttgacggttacaccgataactctgctgcacacccaggtgcacgtggtcaa
cgttataacatgggtctttcaatccgccgcgctcaaagcgttaaggctgagttgatccgt
gatggcgttccagctgctgctattgacatccatggttacggtgaagcgaaaccattggtt
gcaactggaccaaatacacgtgaaccacaaaaccgtcgcgttgaaatcatcctgaagtaa
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