Swingsia samuiensis: E3D00_08050
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Entry
E3D00_08050 CDS
T06080
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
ssam
Swingsia samuiensis
Brite
KEGG Orthology (KO) [BR:
ssam00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
E3D00_08050 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssam03019
]
E3D00_08050 (rnc)
03009 Ribosome biogenesis [BR:
ssam03009
]
E3D00_08050 (rnc)
03036 Chromosome and associated proteins [BR:
ssam03036
]
E3D00_08050 (rnc)
Enzymes [BR:
ssam01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
E3D00_08050 (rnc)
Messenger RNA biogenesis [BR:
ssam03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
E3D00_08050 (rnc)
Ribosome biogenesis [BR:
ssam03009
]
Eukaryotic type
90S particles
RNase
E3D00_08050 (rnc)
Prokaryotic type
rRNA processing factors
E3D00_08050 (rnc)
Chromosome and associated proteins [BR:
ssam03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
E3D00_08050 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
Motif
Other DBs
NCBI-ProteinID:
QDH17520
UniProt:
A0A4Y6UL47
LinkDB
All DBs
Position
1694119..1694859
Genome browser
AA seq
246 aa
AA seq
DB search
MTLSQDQIEDSIQKALGYHFKNIQLLREALTHRSAVSGRRQKGGRKRSAALPKGSGSNER
LEFVGDRVLGLLMAEWLFQHFPQEQEGALGPRHAHLVSRPILAEIADQIGLSAFINIASH
EEAAGIRQLSSIQADAMEAVLGALYLDGGLEPPKYVVHKYWGEKIDSQLRPHKEPKTLLQ
EYLLSLGRPLPHYELISAEGPSHAPVFRIEVKAQGLTGKGEAGSKRLAESAAALDLLKLL
GQNVAP
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgactctttctcaagatcagattgaggattctatacaaaaagcattagggtatcatttt
aagaatattcagcttttaagagaagccttaacacatcgttctgctgtcagtggtcgccgt
cagaagggcgggcgtaagagaagtgctgcgctccctaaaggctcaggatcgaacgaacgt
cttgagtttgtaggcgatcgggtcttggggcttttgatggcagagtggttgtttcagcac
ttccctcaagagcaggaaggggcattaggtccgcggcatgcccatttggtttcgcgtccc
attttagcagaaattgcagatcagattgggctttcggcatttattaatatagcttcccat
gaagaagcggctgggattcgtcagttatcgagtatacaagccgatgcaatggaagctgta
cttggggcgctttatttggacggggggttagaacctcccaagtatgtcgtgcataaatat
tggggagaaaagattgacagtcagcttcgccctcataaagaacccaaaacgttgttgcag
gaatatctcttatctttagggcggcctttgcctcattatgagttgatttctgccgaagga
ccatcacatgcgccagtctttcggattgaagttaaagcgcaaggcttaactggcaaggga
gaggccgggagtaaaaggcttgcagagagtgctgctgcattagatctgttaaaacttctt
ggccagaatgtagcgccataa
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