Swingsia samuiensis: E3D00_08175
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Entry
E3D00_08175 CDS
T06080
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
ssam
Swingsia samuiensis
Brite
KEGG Orthology (KO) [BR:
ssam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ssam03016
]
E3D00_08175 (truA)
Enzymes [BR:
ssam01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
E3D00_08175 (truA)
Transfer RNA biogenesis [BR:
ssam03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
E3D00_08175 (truA)
Prokaryotic type
E3D00_08175 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
QDH17539
UniProt:
A0A4Y6UIT8
LinkDB
All DBs
Position
complement(1715796..1716581)
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AA seq
261 aa
AA seq
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MTDDNIIRWAIRIEFDGTEYVGWQRQNNGISVQELIEKAASQLIGGRPVSSITAGRTDAG
VHAAGLVVHLDFPADVVLNKRQIRDGMGFYLKPHPVVILDAAPVSLDWSARFSAIWRSYR
FTILNRPSRPALHTNRVWHVKRPLNAAAMHEGAQYLLGCHDFSSFRAAACQANSPLRTLD
VLNVHRENEFIFIETKARSFLHHQVRNMVGSLALVGTGKWEPRKMKCVLNAKNRAAAGPT
SPPEGLCFMDVGYLDDPFLAN
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
ttgactgacgataatattattcgatgggctattcgtatcgaatttgacggcaccgaatat
gtcggttggcaacgccaaaataatggaatatcggttcaagaacttattgaaaaagctgcg
tctcaacttattggtggccgccccgtttcaagcataacagcaggccgaactgatgcaggc
gtgcatgcagcaggcctcgtagtccatctcgattttcctgcggatgttgtgcttaataaa
cggcaaattcgggatggaatgggtttttatttaaagcctcatccggtcgttattctagat
gcagcacctgttagccttgactggagcgcacggttttctgcgatttggcgcagttaccgc
tttactattcttaatcgtcccagccgtcctgctctgcacactaatcgggtctggcacgtc
aaacgccctctcaatgctgcggctatgcatgaaggggcacaatacctgttaggctgtcac
gatttttcttcttttagagcagcagcttgccaagcgaacagcccattaagaacgcttgat
gtcctcaatgtacacagagaaaacgagtttatatttatcgaaacaaaagctcgttccttt
ctacaccaccaagtccggaacatggtgggctccctcgctctggtcggcacaggcaaatgg
gaacctcggaaaatgaaatgtgtcttaaatgccaaaaatagagctgcggcagggcctaca
tcccctcctgaaggtctatgctttatggatgttggttatctggatgatccgtttttagcc
aattaa
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