Swingsia samuiensis: E3D00_08925
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Entry
E3D00_08925 CDS
T06080
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
ssam
Swingsia samuiensis
Brite
KEGG Orthology (KO) [BR:
ssam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ssam03036
]
E3D00_08925
Chromosome and associated proteins [BR:
ssam03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
E3D00_08925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_15
AAA_21
AAA_23
CENP-F_leu_zip
DUF3755
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
QDH17671
UniProt:
A0A4Y6UMQ9
LinkDB
All DBs
Position
complement(1877951..1882480)
Genome browser
AA seq
1509 aa
AA seq
DB search
MSSQQNATILGLTITGFKSFADEVQVNILPGLTGIIGPNGCGKSNVVEALRWAMGETSAR
SLRGGELDDLIFAGTGARSARNIAQVMLRLSGTKGLAPSPFQDADELEISRRIERGAGSE
YRINGRVVRARDIQTLFADLSSGARSSGIVSQNRVSQLIAAKPEERRLLLEEAAGITGLH
TRRHDAELKLRQTEANLSRAEDLRLQIEERLSSLNTQTSQARKYRELSELLRETENTLHH
LLHAKGKLAVEKSLQDLKSAKEKLQAAEMDAEQAAIAEFEARQASPHLHENIEKLRSQLE
HHKIKQETLRADLFRAQENEKGAQNHLSQIESDLLQNTQRLTQYRASYDETQQKLILFQE
QIQELPEQEQQLAKEAQKLSEEQQSIVKQLDQTTQQRDTESAALKNIILTIENIQNRIDT
ESQNYHKTALEISELDKTLPQEDAILEIQHKSEEADLYCSHIQNTFTEHQKDLQEKLLQS
ELSKRTLEEETKRFENILRMEKDLQDRLKNIETQLQENHDLFYQNKKNILDDNAKNELQK
NNNTLKNKLNELEREEISKSNDLSQTNTEWLEARAQAEEQIQRYQAIIRSRDTAQRVMNE
AKKKVTLAQENLERDKKALIPAEELTSIRETTEKHSQHLSKTQSDIQKTEKDLLALLEGE
KQTQQSVFQIENAIIRLKTEQESLQISLNAIEKQPNSLEDSLNIPPHLVRAVSAVLANGL
NASLADETTPATQRWRELPNISFSAEAAFGEPLSNLIEAPPALNRRLQSAFLLADQSLAK
DLQKKLSPGQILVCENGALWRWDGFIRSAHAADTGAVRLEQKNRLNDILLQITQHETDLP
DLVVTLQNQSEQREKIEKDLQLYRQKSVEIEHSLNKQRAHMAQLEQRADLAQSRWEESQK
RLEEALQNLQHAKSDWTSLEEDYTAFENPEKFSQKSQKLSEKVTLQRKELEATSLALKTC
RKEVENHTRLLDQALLQHQSAQTRDKEISSHITHMTKERNNLQSEISRVSDNQNKPDLEL
LNTTTLNAQKSYADSEKQLQILSQDLLKAQENKELLHTNLRQIEQLKTQTNAHISSLLAR
RKELETLLQNLQKEREHHQNTLSECPDLSLLEQKISHYASKLEETRSRLKNIENQLSHTA
IQKTRLAGDISAQESRIDDLKQQIHDTQSRSDELNSRQNAIKETIQQSQSQILELETHYT
SFTNALAQTSAEYEEALLKNKAAHSAEQTIQERRRKADATLSAAQANIARFSERAEQAKA
AYIKLQEEIPFPDSASTPLDVSEHNESSIRRQINRLTKEREDLGPVNLRAEIEFQEAKQT
AETIAKEHDELTTAIQKLRQGIHTINGEGRERLLAVFTEVDRNFQSLFSRMFGGGRAHLG
MVGSDDPLEAGLEIFAQPPGKKLSTLSLLSGGEQALTALSLIFATFRCNPAPICVLDEVD
APLDDANVERFCSLLSDMTKETGTHFLVVTHHQLTMAHMNRLYGVTMQERGVSRVLSVDL
GQATTFVNH
NT seq
4530 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcccaacagaacgcaaccattcttggcctaactattacaggatttaaaagtttt
gctgatgaggttcaggtcaatattctccctggcctcacaggaataattggtcctaatggt
tgtggaaagtccaacgtcgtcgaagcacttcgttgggctatgggagaaacatctgctcgc
tccttacgtggtggagagctggatgaccttatttttgcagggaccggggctcgttctgct
cgtaacattgctcaagtcatgttgcgactgagtggaacaaaaggactagctccctctccc
tttcaagatgccgacgaactggaaatttcacgtcgtatagaacgaggagcaggcagcgaa
tatcgtattaatggccgcgttgtccgcgcacgcgatatacaaactctttttgcagacctc
tcatcaggagctcgcagttcggggattgttagccaaaatcgtgttagccaactcattgca
gctaaacccgaagagcgacgccttcttttagaagaagctgctgggattactggccttcat
acaagacgtcatgatgcagaattaaaattacgccaaacagaagccaatctatcgcgagca
gaagacttacgcctgcaaatagaagaacgcttaagcagcttaaacactcagacttcacaa
gcacgcaaataccgagaactctctgaacttttacgagaaactgaaaatactcttcaccat
cttctccatgctaaaggaaagctagcagttgaaaaaagcctccaagatctgaaaagcgca
aaagaaaaacttcaagctgctgaaatggatgctgagcaagcggctattgctgagtttgaa
gcacgccaagcctccccccacctgcacgaaaatattgaaaaattacgcagccagcttgaa
catcataaaatcaagcaagaaacactccgagccgatctttttcgggctcaagaaaatgag
aaaggagctcaaaatcacctttctcaaattgaatcggatcttttacaaaacacacagcgc
cttactcaataccgcgcttcctatgatgaaacgcaacaaaaactaatcttatttcaagag
caaatccaagaattaccagaacaagaacagcagctcgcaaaagaagcccagaaactttct
gaggagcagcaatctattgtaaagcagttggatcaaacgacccagcaaagagacactgaa
agtgctgcactaaaaaatatcattctcacaatagagaatattcagaatagaattgataca
gaaagccagaattatcataaaaccgcattagaaatcagcgaacttgataaaactctccca
caagaagatgccatattagaaattcaacacaaatcagaagaagctgatctttactgctct
catattcaaaatacattcacggaacatcagaaagatctgcaagaaaaactattacaatca
gaactttcaaaacgtactcttgaagaagagaccaaacgttttgaaaatattttacgcatg
gaaaaggacttgcaggatcgtttaaagaatattgagacccaactacaagaaaatcatgat
cttttttatcaaaacaaaaagaatatacttgatgataacgcaaaaaatgaacttcaaaaa
aataataacactctgaagaataaattgaatgagttagagcgtgaagaaatctctaaatct
aacgatttaagccaaaccaatacagagtggttagaagcccgcgctcaagcagaagagcaa
atacaacgctaccaagcgatcatccggtctcgtgatacagcccaaagagtaatgaatgag
gcaaaaaagaaagttacactcgcgcaagaaaatcttgagcgtgacaaaaaagcccttatc
cctgcggaagaattaacctccattagagaaacaacagaaaaacattcccaacatttaagc
aagacacaaagcgatatccaaaaaacagaaaaagatttgctcgctcttttagaaggtgaa
aaacaaacacaacagtctgtctttcaaattgaaaatgcaattatacgtctaaagaccgaa
caagaaagccttcagatttctttgaatgccattgaaaaacagcctaactcccttgaagat
agtttgaatattcctcctcaccttgtaagagctgtttcagcagttcttgcaaacggcctc
aatgcctcattagctgatgaaacaacgccagctacccaacgttggcgggaacttccaaat
atttcgttctcagcagaagctgcttttggtgagcctctttcaaacttaattgaggcacct
cccgcattgaaccggcgccttcaatctgcttttttactagcagatcaaagcctagcaaaa
gatttacaaaaaaaactttctcccggccaaatccttgtgtgtgaaaatggagctttatgg
cgttgggatggctttattcgttcagcccatgcagcagatacaggagccgtccggctggaa
caaaaaaaccgtttgaacgatattcttctccaaatcacacaacacgaaacagatttacct
gaccttgttgttactcttcagaaccaaagtgaacagcgagaaaaaatagaaaaagacctt
cagttatatcggcagaaaagtgttgaaattgaacatagtctcaataaacaacgagcccat
atggctcaactggagcaacgtgctgatcttgctcaaagccgatgggaagaaagtcaaaaa
cgtttagaagaggcgttgcaaaaccttcaacacgctaaatctgattggacctcgctggaa
gaagactatacagcttttgaaaatccagaaaaattttctcaaaaatctcagaaattatca
gaaaaagtcacattacaacgcaaagaattagaagcaacttcattggctctcaaaacatgc
cgaaaagaagttgaaaatcatacacgtcttttagatcaagctcttttacagcaccaatct
gctcagacgcgtgataaagaaatatcatcacacatcacgcatatgacaaaagaacgcaac
aacctccaatctgaaattagtcgagtaagcgacaatcaaaacaaaccagatcttgaactt
ttaaacacgactactttaaacgcccaaaaatcttacgctgattctgaaaagcaattacaa
atcctgtctcaagacttattaaaagctcaagaaaataaagagcttttacatacaaattta
cgtcaaattgagcagctcaaaacacaaactaatgctcatatttcatctttattagcacgt
cggaaagaattagagacactcctccaaaacttacaaaaagaacgagaacaccatcaaaat
acattatcagaatgtcctgatttaagccttttagaacaaaaaatcagtcactatgcttct
aaattagaagaaacacgcagccgactgaaaaatatagaaaatcaactttcccatacggcc
attcaaaaaacacgcttagcaggtgatatatccgctcaagaaagccgtattgatgattta
aaacaacaaattcatgatacacaaagcagatcagacgagcttaactctcgtcaaaatgcc
ataaaagaaaccatacaacagtcacaaagtcagatcctcgaacttgaaacgcattatacg
tcttttacaaatgctcttgctcaaacaagcgcagaatatgaagaggctcttttaaaaaac
aaagcggctcattcggctgaacaaaccattcaagaacggcggcgcaaagctgacgcaaca
ctctccgctgcacaagcaaatattgctcgtttttcagaaagagccgagcaagccaaagcc
gcctatatcaaactacaagaagaaattccttttcctgattctgcttcaactcccttggat
gtatccgaacacaacgaatcctccatccgacgccaaatcaatcgactaaccaaagaacga
gaggaccttggtccagtcaatctaagagccgaaattgagtttcaagaagcaaagcaaacc
gcagaaacaatcgccaaagaacatgacgagttaaccactgccatccaaaagcttcgacag
ggcattcatactattaacggtgaaggccgtgaacgactgcttgctgttttcacagaagta
gaccgtaattttcaatccttattctctcgtatgtttggtggagggcgtgctcatttgggg
atggttggcagtgacgacccattagaagcgggtctagaaatatttgcacagcctccggga
aaaaagctttcaactctttctcttctttctggaggagagcaagctcttactgctctctcg
cttattttcgcaacattccgctgtaaccctgcccccatctgcgttcttgatgaagtcgat
gcaccacttgatgatgccaatgttgagcgtttttgttctcttctatcagacatgaccaaa
gagacaggcacacactttctcgtcgttactcatcatcaattaaccatggctcatatgaac
cgattatatggtgtcacaatgcaggaacgtggggttagtcgtgtcttgtctgttgacctt
ggacaggcaacgacattcgttaatcactaa
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