Swingsia samuiensis: E3D00_09850
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Entry
E3D00_09850 CDS
T06080
Name
(GenBank) lytic transglycosylase domain-containing protein
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
ssam
Swingsia samuiensis
Brite
KEGG Orthology (KO) [BR:
ssam00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ssam01011
]
E3D00_09850
Enzymes [BR:
ssam01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
E3D00_09850
Peptidoglycan biosynthesis and degradation proteins [BR:
ssam01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
E3D00_09850
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Paralog
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GFIT
Motif
Pfam:
SLT
TPR_2
TPR_8
TPR_6
Motif
Other DBs
NCBI-ProteinID:
QDH17837
UniProt:
A0A4Y6UNA0
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Position
complement(2072653..2074545)
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AA seq
630 aa
AA seq
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MSLYRINRAFLLASSVFLSVTFSAHAQSTDVQSRLNEWLILTSPEGTNLPAERYADFLTK
GPIWPQNARILWRYQNALSQISDPDTLKALCRVQPLTIMAAFLVCHGQLLEESKKAKLIW
QSGAGSASDESLFLNQYSSDLSSDDYWKRYETLEKSGNIASARRQISFLTPAQQALAQAR
LAQKTNSADADYLFSSLPSELRQDPTLIRYRLKMLRHSERFNEALDLWHSAGIAIQENSP
SHEWSAERLSFAHALLLNNDIENAANIADDTSLPLSTSDRLEAQFFSGFIQLRFFKKPDQ
AEHFFSPLTDAVSLATQSQGWYWIGRSRQELGDVKEAQKAFINAAKNPTTFYGQLALAAL
NNEIGLLNANPNVSSRFLSDLQHRLDIVPNIKGTAPENLQRSDLVQAAILLSQSGNSEKA
KVFLLFLLSTTHEPADQKSIADLSERLNIPAGEVFAAHTLAHSRIALYPQGYPSPWQEPT
TTSLPSDFLLSVIRQESGFDTQAISSAHAIGLLQLLPTAAYDVARKAHLRVNTSSAALLD
PSTNILIGSAYLEQLLEHFDNVVPYALAAYNAGPHRVDTWLQSEQSNNTNLTDEYLIDWI
EKIPYQETRTYIKNIEGNMWVYRASKNYVR
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgtctctttatcgcattaaccgggcttttctcttagcttcttctgtctttctttcagta
acattctctgcgcatgcacagagcacagatgttcagtccagactaaacgaatggttaatt
ttaacctcaccagagggtacgaatttaccagctgagcgatacgccgatttccttaccaag
gggccgatatggcctcaaaatgctcgtatcttatggcgttatcaaaacgctctatctcaa
atttctgatcctgatacgctaaaagctctttgtcgtgtccagcctttaaccattatggca
gcttttcttgtttgccatgggcagctcttggaagaatctaaaaaggcaaaactaatttgg
caatcgggagcaggatcagcatctgatgaaagtttatttttaaatcaatatagtagtgat
ttatcgtctgatgattattggaaacggtatgaaacgctagagaaaagcggaaatattgca
tccgccagacgacaaatctcgtttttaacaccagcacaacaagctttagctcaagcacgt
ctggcgcaaaaaacaaacagcgcagatgctgattacttattctcaagccttccatctgaa
ttacgacaagaccctacgcttatccgttatcgccttaaaatgttacgtcactcagagcgt
tttaatgaagcgttggatctatggcactcggccggaatcgctattcaagaaaactctcca
tcgcatgagtggtctgctgaacgccttagttttgctcatgcattattgttgaataatgac
atcgagaacgctgcaaatatagcagatgatacctcccttcccttatcaacatcggatcga
ttagaagcgcagttcttttctggatttattcaattacgcttctttaaaaagcccgaccaa
gcagagcatttcttttcccctttaactgatgcagtctcgttagctactcaatctcaaggg
tggtattggattggaagatctagacaagaactcggagacgttaaagaagcacagaaagct
tttataaatgcggccaaaaaccctacaacattttatggtcaattggctttagcagctctt
aacaatgaaattggattgttaaatgcaaatccaaacgtatcttcaagatttctttctgat
ttacagcatcgccttgatatagttcctaatattaaaggaactgctcctgaaaaccttcaa
aggtctgacctagttcaggcagcaatattattatctcaaagtggcaattcagaaaaagcc
aaggtttttttattgtttttacttagcacaacacatgaaccagccgaccaaaaatcaatc
gctgatttaagcgagcgacttaacatcccagctggggaagtttttgcagcgcacactctc
gcccattccagaatagcgctttatcctcaagggtatccatctccttggcaagagcccact
actaccagtttaccctctgattttcttttatctgttatacgccaagaaagcggatttgat
acacaagcgatcagctcagcccatgccataggcttgttgcaacttctccctacggcagct
tatgacgtagctcgaaaggcacatttaagggtcaatacatcatcagcagcattattagac
ccttcaaccaatattctaatcggctcagcttatttggaacaattgttagagcattttgat
aatgtagtgccttacgctttagcagcatataatgcaggaccacaccgcgtagacacatgg
ctccagtcagagcaatctaacaatactaaccttacggacgaatatttaattgattggatt
gaaaaaattccttatcaagaaacgcgtacatatataaaaaatatagaaggtaatatgtgg
gtatatagagcgagtaaaaattatgtacgataa
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