Swingsia samuiensis: E3D00_10095
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Entry
E3D00_10095 CDS
T06080
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ssam
Swingsia samuiensis
Pathway
ssam03420
Nucleotide excision repair
ssam03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ssam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
E3D00_10095
03430 Mismatch repair
E3D00_10095
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssam03400
]
E3D00_10095
Enzymes [BR:
ssam01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
E3D00_10095
DNA repair and recombination proteins [BR:
ssam03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
E3D00_10095
MMR (mismatch excision repair)
Other MMR factors
E3D00_10095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
AAA_11
Motif
Other DBs
NCBI-ProteinID:
QDH17881
UniProt:
A0A4Y6UNC6
LinkDB
All DBs
Position
complement(2118936..2121161)
Genome browser
AA seq
741 aa
AA seq
DB search
MQHNSLTPSSDYLSRLNSEQRRAIETTEGPLLILAGAGTGKTRVLTTRFAHILLTGKAYP
SQILAVTFTNKAAKEMKERVGAILGEPVEGLWLGTFHAICARMLRRHAEYVQLTSGFNIL
DTDDQLRLLKQVMEPFQIDTKRWPPNQLLGIIQRWKDRGLTPDRVTPVEDTDFANGHALA
IYRLYQERLQTLNACDFGDLMLHVVEILRTKPDVLAQYHRIFRYILVDEYQDTNTIQYLW
LRLLAKRHDGISNIACVGDDDQSIYSWRGAEIENILRFEKDFPGAKVVRLEENYRSTDQI
LAAAAGLISHNEGRLGKTLRSGRKNAHGEKVQIIGVHDSDEEARVVGGAIERLQKSGHPL
SEIAILMRAGFQTRPFEERLLMLGVPYRVVGGLRFYERAEIRDCLAYMRVLSQPSDDLAF
ERIINVPKRGIGAVALQKLHKEAQTLPCSLVDAVNIQLSTDSLKGKSKKALSHLMANFTQ
AKATLDTEGHVVASEQLLEESGYLQMWRDDRSVEAPGRLENIRELMRAIGDFATLEGFLE
HVALVMDIDRTETDEKVNLMTLHGAKGLEFDTVFLPGWEEGVFPSQRSLDEGGNRALEEE
RRLAYVGLTRARQRAVILHAASRRIYANWQSSIPSRFIDEIPLEYIDMRGESVEKRRQAS
FSPSMFASGTFTSTRSNRSQPAYKRITDIKETTAHIPLGATVFHQKFGEGLVISSDGDRL
EVNFNNVGIKRILANFVEIKS
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
gtgcaacataattctcttaccccctcttcggactatttgtctcgattaaattcagagcaa
cggcgtgcaattgaaacaacagaggggcctttgttgattcttgctggtgcaggaacaggc
aaaacgcgtgtgttaactacacgttttgcccatattttactaactggcaaagcatatcca
agtcagattttagcggtcacttttacgaataaagcggctaaagaaatgaaggagcgggtt
ggtgctatcttaggtgaacctgttgaagggttatggctgggcacttttcatgccatttgt
gcgcgcatgctgcggcgtcatgcagagtatgtccagttaacatctggatttaatatctta
gacacagacgatcagctccgtcttttaaaacaagtgatggaaccgtttcagattgataca
aaacggtggcctcccaatcagttattgggaattattcagcgatggaaagatagaggatta
acccctgatcgggtaacgcctgtagaagatacagattttgctaatggccatgccctagct
atttaccgcctctatcaagaacgtcttcagactttaaatgcatgcgactttggggatctt
atgttgcatgtggttgaaattttaagaacaaagcctgatgttctggctcagtatcataga
atttttaggtatatattagtcgatgaatatcaggatacgaatacgatccaatatttgtgg
cttaggcttctcgcaaagcgtcatgatggcatttcaaacattgcttgtgtaggtgatgat
gatcagtccatctattcttggcgaggagcagaaatcgaaaacatattgcggtttgagaaa
gatttcccaggggctaaagttgttcgtcttgaagaaaattatcgatcaacggaccaaatt
ttggcagctgcggctggtttaatttcacataatgaagggcgactaggaaaaaccctgcgt
tctgggcgtaagaacgctcacggtgagaaagttcagattataggcgtgcatgattcagat
gaggaagcgcgcgttgtcggtggagctatagagcgccttcagaaatcagggcatcctctc
tctgagattgctattttgatgcgtgcaggcttccagacgcgtccttttgaagagcgtctg
ttaatgctaggggtcccttatcgcgttgtgggtggtttgcgtttttacgaaagagctgaa
attcgggattgtctcgcttatatgcgtgttttatctcagccatcagatgatttggccttt
gagcgtatcattaacgttcctaaacgtgggatcggtgctgttgctcttcagaaattgcat
aaagaggctcaaacccttccctgctctcttgttgatgctgtaaatattcagctttctaca
gacagtctgaaagggaaatcaaaaaaagctttatctcatctgatggctaattttactcag
gcgaaagcaacactggatacagaaggacatgtcgttgcaagtgagcagcttttggaagaa
tcaggttatcttcaaatgtggagagatgatcgatctgtcgaagcgccagggcgtcttgaa
aatattcgtgagcttatgcgggcgattggtgattttgcaacgcttgaagggtttttagag
catgtggctttagtcatggatattgatagaactgaaacagatgagaaagttaatctcatg
acgcttcatggtgcaaaaggactggagtttgatactgtttttcttcctggttgggaggaa
ggagttttcccatcccagcggtcattagatgaaggtggtaatcgagcgttagaagaagaa
cgtcgccttgcttatgttggtcttacacgtgcgcgccaacgggctgttattttacacgcg
gcaagccgacgcatttatgcgaattggcaaagttcgatccctagtcgatttattgatgaa
ataccgttagaatatatagatatgcggggagaaagtgttgaaaaacggaggcaagcttct
tttagtccgtccatgtttgcgtcgggtacttttaccagtacacgttctaaccgttcacag
cctgcttacaaaagaattacagatataaaagaaacaacagctcatattccccttggggcg
acagtttttcatcaaaaatttggagaggggttagtcatttcttcagacggtgatcggttg
gaagtgaactttaataatgtcggaataaaacgcattttagcgaattttgtggagataaaa
tcatga
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