Sphingomonas sanxanigenens: NX02_04970
Help
Entry
NX02_04970 CDS
T03929
Name
(GenBank) hypothetical protein
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
ssan
Sphingomonas sanxanigenens
Pathway
ssan03030
DNA replication
ssan03430
Mismatch repair
ssan03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ssan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NX02_04970
03430 Mismatch repair
NX02_04970
03440 Homologous recombination
NX02_04970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssan03032
]
NX02_04970
03400 DNA repair and recombination proteins [BR:
ssan03400
]
NX02_04970
Enzymes [BR:
ssan01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NX02_04970
DNA replication proteins [BR:
ssan03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NX02_04970
DNA repair and recombination proteins [BR:
ssan03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NX02_04970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_gamma3
DNA_pol3_delta2
DUF3646
DNAX_ATPase_lid
AAA
AAA_22
AAA_5
RuvB_N
AAA_30
AAA_16
AAA_19
AAA_14
PIF1
AAA_assoc_2
DUF815
AAA_18
AAA_24
Glyco_tranf_2_5
Adeno_E1B_55K_N
TsaE
Motif
Other DBs
NCBI-ProteinID:
AHE52735
UniProt:
W0AAN3
LinkDB
All DBs
Position
980844..982634
Genome browser
AA seq
596 aa
AA seq
DB search
MSESQQPYRVLARKYRPQTFAELIGQDAMVTTLGNAIKRGRLAHAFLLTGVRGVGKTSTA
RLIAKALNCIGPDGQGGPTISPCGVCEPCIAIAEGRHIDVIEMDAASHTGVDDVREIIEA
SRYAAVSARYKVYIVDEVHMLSKNAFNALLKTLEEPPAHVKFLFATTEVNKVPVTVLSRC
QRFDLRRISAELLAAHFRRVVEAEGVVAEDEALALIARAAEGSARDGLSILDQAIAHAGL
EGNAGVSAAQVRDMLGLSDRGAVRRLFGLLMAGDAPAALRLLNDQYDLGVDPVAVLRDLL
GVVHGVTLVRVGVAADPAQSAEEREAFAGWATQLSFASLHRLWQLMLKGHDEVTRAALPL
EAAEMALLRVIHAAEMPDPGELAKRLLRGEMPGLPPSGGAPVSGGGSPPPSSSSAAPEAP
AAAPPPRSFAPEPPPPWDQAPDGPPAWEEEQAPPPSPPPSPPPAAEPAGPALPADFTALV
RMLGDGGKLQLQQQVHDYMGLVRFAPPELVLKPSRPVLPDFVRQLAEALKATTGAVWKVS
LGEGQAEPTLLDQERMRETAARDAILAMPLVRATIEAFPEAELIHPYPLEARNGTL
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaatcccagcagccctatcgcgtcctcgcccgcaaatatcgtccgcagaccttc
gccgaactgatcggccaggatgcgatggtcaccacgctcggcaacgcgatcaagcgcggc
cggctggcgcatgccttcctgctcaccggcgtgcgcggggtcggcaagacctcgaccgcg
cggctgatcgccaaggcgctcaactgcatcgggccggacgggcagggcggccccaccatc
tcgccatgcggcgtctgcgagccctgcatcgccatcgccgaaggccgccacatcgacgtg
atcgagatggacgccgccagccataccggcgtggacgacgtgcgcgagatcatcgaggcg
tcgcgctatgcggcggtctccgcgcgctacaaggtctatatcgtcgacgaggtccacatg
ctgtcgaagaacgcgttcaacgcgttgctgaagacgctggaggagcctccggcgcatgtg
aagttcctgttcgccaccaccgaggtcaacaaggtgccggtgacggtgctgtcgcgctgc
cagcgcttcgacctgcgccgcatttccgccgagctgctcgccgcgcatttccgccgggtg
gtcgaggccgagggcgtggtcgccgaggatgaggcgctggcgctgatcgcgcgcgccgcg
gaagggtcggcgcgcgacggcctgtcgatcctcgaccaggcgatcgcgcatgccgggctt
gagggcaatgcgggcgtgagcgccgcgcaggtgcgcgacatgctcggcctttccgatcgc
ggcgcggtgcggcggctgttcgggctgctgatggcgggcgatgccccagcagcgctgcgg
ctgctcaacgatcaatatgatctgggcgtcgatccggtggcggtgctgcgcgatctgctg
ggcgtcgtccatggcgtcacattggtgcgcgtgggcgtggccgccgatccggcgcagtcc
gccgaggagcgggaggcgttcgccggctgggcgacgcagctttccttcgcgtcgctgcac
cgtctgtggcagctgatgctcaaggggcatgatgaggtgacccgcgcggcgttgccgctc
gaggccgccgaaatggcgctgctgcgcgtgatccacgccgccgagatgcccgatccgggc
gagttggcgaagcggctgctgcgtggcgagatgccggggctgccgccttcggggggcgcg
ccggtgtcgggtggcggatcgccgccgccgtcctcatcgtccgccgcgcccgaggcaccc
gccgccgccccgccgccgcgatccttcgcgcccgagccgccgccgccctgggatcaggcg
ccggatggcccgccggcctgggaggaggaacaggcgccgccgccgtcaccgcccccgtca
ccaccgccggccgccgaacccgccggccccgccttgccggccgatttcaccgcgctggtg
cggatgctgggcgatggcggcaagctgcagcttcagcagcaggtccacgattatatgggg
ctggtgcgcttcgcgccgcccgaactggtgctcaagccgtcgcgcccggtgctgccggat
ttcgtgcgccagcttgccgaggcgctgaaggcgacgacgggcgccgtgtggaaggtctcg
ctgggcgagggccaggcggagccgaccctgctcgaccaggagcgcatgcgtgaaacggcg
gcgcgcgatgccatattggcgatgccgctggtgcgcgcgacgatcgaggcctttccggag
gccgaactcatccacccctatccgttggaagcaaggaacggaacgttatga
DBGET
integrated database retrieval system
