Sphingomonas sanxanigenens: NX02_08325
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Entry
NX02_08325 CDS
T03929
Name
(GenBank) hypothetical protein
KO
K21470
L,D-transpeptidase YcbB
Organism
ssan
Sphingomonas sanxanigenens
Brite
KEGG Orthology (KO) [BR:
ssan00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ssan01002
]
NX02_08325
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ssan01011
]
NX02_08325
Peptidases and inhibitors [BR:
ssan01002
]
Cysteine peptidases
Family C82
NX02_08325
Peptidoglycan biosynthesis and degradation proteins [BR:
ssan01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
NX02_08325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
DUF1161
Motif
Other DBs
NCBI-ProteinID:
AHE53389
UniProt:
W0A5Z8
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All DBs
Position
complement(1715795..1717027)
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AA seq
410 aa
AA seq
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MRFSAKTLAAALATSVSAFVVAAPFALMSSSAAGTNPLPAVTPVDPAPRGAWSQTAVQDL
VAEAHASLGEGMDPAAYDIAGLLAVADGTDTTEIDRRANALALALADDYANGLIRQRSRY
DWHIEAPAMDRMQLAGGLRHAVAVGGVRPWLRSLLPQDPRYVALRHAYATSGDAAVRDRL
RVNLERWRWMPRTLGEDHIYVNVPSYTLAVVDNGQAVSQYTVVVGSPRTPTPQLALQASA
IVVNPSWTVPESIARKGMGAGFQRISTGGYTRYVQAPGPRNALGKFKIDMPNPHAIYLHD
TPSKALFARDSRAFSHGCIRVKDIDRLAAELVATDDGAEATLERAAAGATTRTVTLDRKL
PVYLVYFTADVDANGQLTLLEDPYGRDARVLQDLSPAKRMADKAAAPTKA
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttcagtgcgaaaacccttgcggccgctctcgcgaccagcgtcagcgccttcgtc
gtcgccgccccgtttgcgctgatgtcgtcgtcggcggcgggcaccaatccgcttcccgcg
gtcaccccggtcgatcccgccccccgcggtgcctggtcgcagacggcggtgcaggatctc
gtggccgaagcgcatgcatcgctgggcgagggcatggaccccgccgcctacgacatcgcc
ggtctgctcgcggtcgccgacggcaccgacaccaccgagatcgaccgccgcgccaatgcg
ctcgcgctcgcgctggccgacgactatgccaatggcctgatccgccagcgctcccgctat
gactggcatatcgaagcaccggcgatggatcgcatgcagcttgctggcggcctgcgccat
gcggtcgccgtgggcggcgtccgcccctggctgcgcagcctgctgccgcaggatccgcgc
tatgtcgcgctgcgccacgcctatgcgaccagcggcgatgccgcggtgcgcgaccgtctg
cgcgtcaacctcgagcgctggcgctggatgccgcgcacgctgggcgaggaccatatctat
gtgaacgtgccgagctatacgctggcggtggtcgataacgggcaggcggtatcgcaatac
accgtcgtcgtcggatcgccgcgcacgccgaccccgcaattggcgctgcaggccagcgcg
atcgtcgtcaacccgtcgtggacggtgccggaaagcatcgcccgcaaggggatgggcgct
ggcttccagcggatcagcaccggcggctacacccgctatgtgcaggcgccaggcccccgc
aacgcgctcggcaagttcaagatcgacatgcccaacccgcatgcgatctacctgcacgat
acgccctccaaggcgctgttcgcacgggactcgcgggcgttcagccatggctgcatccgc
gtgaaggacatcgaccgcctcgccgccgaactcgtcgcgactgacgatggtgccgaggcg
accctggaacgcgccgcggcgggcgccaccacgcgcaccgtgacgcttgatcgcaagctg
cccgtctacctcgtctatttcaccgccgacgtggacgcgaacggccagttgacgctgctg
gaggatccctatggtcgcgacgcgcgcgtgctgcaggacctgagcccggccaagcggatg
gccgacaaggcagcggcaccgaccaaggcataa
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