Sphingomonas sanxanigenens: NX02_08380
Help
Entry
NX02_08380 CDS
T03929
Name
(GenBank) transcriptional regulator
KO
K03530
DNA-binding protein HU-beta
Organism
ssan
Sphingomonas sanxanigenens
Brite
KEGG Orthology (KO) [BR:
ssan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssan03032
]
NX02_08380
03036 Chromosome and associated proteins [BR:
ssan03036
]
NX02_08380
03400 DNA repair and recombination proteins [BR:
ssan03400
]
NX02_08380
DNA replication proteins [BR:
ssan03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
NX02_08380
Chromosome and associated proteins [BR:
ssan03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
NX02_08380
DNA repair and recombination proteins [BR:
ssan03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
NX02_08380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
Phage_cement_2
HU-CCDC81_bac_2
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
AHE51684
UniProt:
W0A181
LinkDB
All DBs
Position
1732274..1732549
Genome browser
AA seq
91 aa
AA seq
DB search
MNNADLAERLAADHGLTKADARKYVDGILAAIVDAAAAGQEVSLNGFGKFKLKETAAREG
RNPATGATIQIAAAKKLTFAPAKAVKDKLNG
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgaacaatgccgatctcgccgagcgccttgccgcggaccatggcctgaccaaggctgat
gcccgcaagtatgttgacggcatcctcgctgccatcgtcgatgcggctgccgctggccag
gaagtctcgctgaacggcttcggcaagttcaagctcaaggaaaccgccgcccgtgaaggc
cgcaacccggccaccggcgcgacgatccagatcgcggccgccaagaagctgaccttcgcc
cccgccaaggcggtcaaggacaagctgaacggctga
DBGET
integrated database retrieval system
