Sphingomonas sanxanigenens: NX02_08515
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Entry
NX02_08515 CDS
T03929
Name
(GenBank) hypothetical protein
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
ssan
Sphingomonas sanxanigenens
Brite
KEGG Orthology (KO) [BR:
ssan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssan03400
]
NX02_08515
Enzymes [BR:
ssan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NX02_08515
DNA repair and recombination proteins [BR:
ssan03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
NX02_08515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
AHE53426
UniProt:
W0A8J9
LinkDB
All DBs
Position
1759903..1762872
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AA seq
989 aa
AA seq
DB search
MSAAARPAVFTIPAYRAFADALAAGIIARWGGSPLELARGIVILPNNRAQRALTDAFVRR
AEGGLLLPRLIAIGDDDLDERIGPLFDPAEGESPPPPAIEPLDRQMRLARLVQVARRDAG
VPVDAAEAVRLAADLARTLDQLIIEEVDPRRLRELEIAPELSAHWARALDLLAVILDRWP
RELAEIGRIDRATRRNLLLRQTAERWKREAPPGFVVAAGVTVAAPAVAALLKSIAWLKRG
MVVLPGFDQAMPADEWEALGPFPADSGRRAVETHPQFNLKLLLDRMDIAPGEVERWRWGG
GHDASAARGRAVNNALKPARFTGKWHELEAPERLLTGVRTLEAATPAEEAQAIAIALREA
LETPERTAALVTPDRGLARRVSALLRRWEIAADDSAGVPLSMTPPGALLLGLADAAAQRL
APPALLAVLKHPLVRAGEGRLAWLEGVRALDLALRGPRPAEGSAGLAAFLLEGDARTAML
RESARPFWDEAAPLLAPLEATFRDADGGRLEPLLAALRDVATALCGDAIWSGPAGRAAAD
LLADAERCAANGPRDVSAEGIGPLLRRLMDDVAVRPPQGGHPRIAIWGLIEARLQQADLV
ILGGLNEGTWPSVPPPDPWLAPRIRSELGLPGLDRRIGLAAHDFAGALGAPDVIVTRAHR
DTAPTVASRFWLRLAAIDPPDREHRRADRFVALARRLDRALHEPARRPAPVPPVAERPTR
ISVTEVDRLKADPYAFYARRMLRLLPLDMIDADPTPAWRGTAIHAVLEAWARDDACAPEK
LRDRALAMLAGPGSHPLVRALWEPRLMEAVGWIAETIVEMRSEGRIVATVEAKGAVEIGG
ITLDGRVDRIDRLPDGSLAIVDYKTGTPPSARAVRAGYSLQLGLLGLIAERSGFGEVGGK
AGAFEYWSMARRKKGQGFGYIETPVAPDGARGKIPTDQFVGIAAANFIEAAEKWLTGEAA
FTAKLHPEFAPYAEYDQLMRLDEWYGRDG
NT seq
2970 nt
NT seq
+upstream
nt +downstream
nt
ttgagtgccgcggctcgccccgcggtcttcaccatccccgcgtatcgcgcctttgccgat
gcgctggcggcgggaatcattgcgcggtggggcggttccccgctggaactggcgcggggc
atcgtcatcctgccgaacaaccgcgcgcagcgggcgttgaccgacgccttcgtgcgtcgc
gcggagggcgggttgcttttgccgcggctgatcgcgatcggcgacgatgatctcgacgag
cggatcgggccgctgttcgatccggccgagggcgaatcgccaccgccgccggcgatcgag
ccgctcgatcggcagatgcgcctggcgcggctggtgcaggtggcgcgacgcgacgccggc
gtgcccgtcgatgcggcagaggcggtgcgcctcgccgccgatctcgcgcgcacgctcgac
caactgatcatcgaggaggtcgatccgcgccgtctccgcgaattggagatcgcgcccgaa
ctttcggcgcactgggcgcgcgcgctcgatctgctggcggtcatcctcgatcgctggccg
cgcgaacttgcggagatcggccggatcgaccgcgcgacccgccgcaatctgctgctgcgc
cagaccgccgagcgctggaagcgggaagcgccgccgggtttcgtcgtggccgcgggcgtg
acggtggcggcgcccgcggtcgcggcgctgctcaagagcatcgcctggctgaaacggggc
atggtcgtgctgcccggtttcgatcaggcgatgcccgcggacgaatgggaggcgctgggg
cctttccccgcggacagcggccgccgcgcggtggagacacacccgcagttcaacctcaag
ctgctgctcgatcgcatggatatcgcccccggcgaggtcgagcgttggcgctggggcggc
ggccatgatgccagcgccgcgcgggggcgcgcggtcaataacgcgctcaagcccgcgcgc
ttcaccggcaagtggcacgagctcgaggcgccggagcggctgctgaccggggtgcgcacg
ctggaagccgccaccccagcggaggaagcgcaggcgattgccatcgctttgcgcgaggcg
ctggaaacacccgaacgcacggctgccctggtaacgcccgatcgcggtctcgcgcggcgg
gtgtcggcgctgctgcgccgctgggagatcgccgccgacgacagtgccggcgtgccgctg
tcgatgacgccgccgggcgccttgctgctcggtctggcggatgccgccgcccagcgcctc
gcgccgcccgccttgctggccgtgctcaaacatccgctggtgcgcgcgggagaggggcgg
ctcgcttggctggagggcgtgcgcgcgctcgatctcgcgctccgcgggccgcggccggcg
gaagggagcgccggccttgccgctttcctgctcgaaggggacgcgcgcacggcgatgctg
cgcgaaagtgcgcgcccgttctgggatgaggccgcgcccttgctggcgccgctggaggcc
acgttccgcgacgccgacggcggccggctcgaaccgctgctcgcggcgctgcgcgatgtc
gcgaccgccctgtgcggcgacgcgatctggtcggggcccgccggccgcgccgccgcggat
ctgctcgccgacgccgagcgctgcgccgccaacggcccccgcgacgtcagcgccgagggc
atcggtcccttgcttcgccggctgatggacgatgtcgcggtgcgtccgccacagggcggc
catccgcgcatcgcgatctgggggcttatcgaggcgcggctgcagcaggcggacctggtg
atcctcggcgggctcaacgagggcacctggccctcggtgccgccgccggacccctggttg
gcgccgcgcatccgcagcgagctcggtctgcccggactcgaccgccgcatcggccttgcc
gcgcacgacttcgccggcgcgctcggcgcgcccgatgtgatcgtcacccgggcgcatcgc
gacactgcgcccaccgtcgcctcgcgcttctggctgcgcctcgcggcgatcgatccaccc
gaccgcgagcatcgccgcgccgaccgcttcgtggcgctcgcccgccggctcgaccgcgca
ttgcatgagcccgcccggcgacccgccccggtgcccccggtcgccgagcggccgacgcgg
atcagcgtgaccgaggtcgatcggctgaaagcggacccttacgcgttctacgcgcggcgg
atgctgcgcttgttgccgctcgacatgatcgatgccgatcccacaccggcttggcgcggc
accgcgatccacgcggtgctcgaagcctgggcgcgtgacgatgcctgcgcgcccgaaaag
ctgcgcgaccgcgccctggcgatgctcgccggccccggatcgcatccgctggtccgcgcg
ctctgggaaccgcggctgatggaggcggtcggctggatcgcggagaccatcgtcgagatg
cgaagcgaggggcgcatcgttgcgacggtcgaggcgaagggcgcggtcgagatcggcggc
atcacgctcgacggccgtgtggatcgtatagaccggctccccgacggcagccttgcgatc
gtcgactataagacgggtacgccacccagcgcgcgcgcggtgcgtgccggctattcgctg
caactggggctgctcgggttgatcgcggaacgcagcggcttcggggaggtcggcggcaaa
gcgggtgcgttcgaatattggtcgatggcgcgacgcaagaaggggcaagggttcggctac
atcgaaacccccgtcgcgcccgatggcgcgcgcggcaagatccccaccgaccagttcgtc
ggcatcgccgctgccaatttcatcgaggcggcggaaaaatggctgacgggcgaggcggcc
ttcaccgccaagctccaccccgaattcgcgccctatgccgaatatgaccagttgatgcga
ctggacgaatggtatggccgcgatggctag
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