Sphingomonas sanxanigenens: NX02_11025
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Entry
NX02_11025 CDS
T03929
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ssan
Sphingomonas sanxanigenens
Pathway
ssan03420
Nucleotide excision repair
ssan03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ssan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NX02_11025
03430 Mismatch repair
NX02_11025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssan03400
]
NX02_11025
Enzymes [BR:
ssan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NX02_11025
DNA repair and recombination proteins [BR:
ssan03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NX02_11025
MMR (mismatch excision repair)
Other MMR factors
NX02_11025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
PcrA_UvrD_tudor
AAA_12
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AHE53917
UniProt:
W0ABN4
LinkDB
All DBs
Position
complement(2268002..2270233)
Genome browser
AA seq
743 aa
AA seq
DB search
MNEPQRQAVLTTEGPVLVLAGAGTGKTAALTARLAHLIATRRAWPSEILAVTFTNKAARE
MRERVGRLVGDAVEGMPWLGTFHAIAAKMLRRHAELVGLQANFTILDTDDQLRLLKQLIA
AAELDEKRWPARQLAGLIDRWKNRGLVPADLDAGESELFANGRGQDLYRAYQDRLRALNA
CDFGDLLLHMLTILKRHRDVLELYQQRFKYVLVDEYQDTNSSQYLWLRLIAQAHKNICCV
GDDDQSIYSWRGAQVENILKFEKDFPGAAIIRLEQNYRSTPHILAAASAVIANNGGRLGK
SLWTERDAGEKVQVIGVWDGPEEARRIGDEIETHRLRGGSYDDVAILVRAQFQTRELEDR
FIQIGLPYRIIGGFRFYERAEIRDALAYLRLVHQPSDDLAFERIVNVPKRGLGDKAVAKI
HMFARASDAPLLHAAARLLDTDELTSAARRTLGNFVTDVARWRDRANDLPHAELARLILD
ESGYTGVLQAEKSVEASGRLENLNELIRAMEEYETLGAFLEHVSLVMDNDAAVEDAKVTV
MTIHAAKGLEFDTVFLAGWEEGVFPSQRALDEGGLASLEEERRLAYVAITRARRRAAILH
AANRRIYGQWTSSIPSRFVGELPEAHVQAESSMSGGESLWRANWSEHADPFSSVARSTGR
GPGWQRAATTGSFSREPARVVEARASAVSLGNKGRSDLQCGMRVFHQKFGYGAIVEIEGN
KLEIDFETAGRKRVMDSFVTIPG
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
ttgaacgaaccccagcgccaggcggtgctgaccaccgagggcccggtgctggtgcttgcc
ggggcaggcacgggcaagaccgctgcgctgaccgcgcggctcgcgcatctgatcgcgacg
cggcgtgcgtggccgtccgagatcctcgccgtgaccttcaccaacaaggcggcgcgcgag
atgcgcgaacgcgtcggccggctggtgggcgatgccgtggaaggcatgccatggctgggc
accttccacgcgatcgccgcgaagatgctgcgccgccatgccgaactggtggggctgcag
gccaatttcacgatcctcgataccgacgatcagctgcgcctgctcaagcagttgatcgcc
gccgccgagctcgacgagaagcgctggccggcgcgccaattggcgggcctgatcgatcgc
tggaagaacagggggctggtccctgccgacctcgatgcgggcgaaagcgagctgttcgcc
aatggccgcggccaggatctgtatcgcgcctatcaggatcggctgcgggcgttgaacgcg
tgcgatttcggcgacctgctgctgcacatgctgaccatcctaaagcgccatcgcgacgtg
ctggagctgtatcagcagcgcttcaaatatgtgctggtcgacgaatatcaggataccaat
tcgagccagtatctctggctgcggctcatcgcgcaggcgcacaagaacatctgctgcgtc
ggcgacgacgaccagtcgatctattcctggcgcggcgcccaggtcgagaatatcctgaag
ttcgagaaggacttcccgggcgctgcgatcatacggctcgaacagaattaccgctcgacg
ccgcacatcctggccgccgcctccgcggtgatcgccaacaatggcgggcgcctcggcaaa
tcgctgtggaccgaacgcgacgccggcgagaaggtgcaggtgatcggcgtgtgggatggg
ccggaggaagcccgccgcatcggcgacgagatcgagacacaccggctgcgcggtggatcc
tatgacgatgtcgccatcctcgtccgcgcgcagttccagacccgcgagttggaagaccgc
ttcatccagatcggcctgccctatcgcatcatcggcggtttccgcttctacgagcgcgcc
gagatccgcgatgcgctggcctatctccgcctcgtccaccagccgtcagacgatctcgcg
ttcgagcgcatcgtcaacgtgcccaagcgcggtctcggcgacaaggccgtggcgaagatc
cacatgtttgcccgcgcatccgacgcgcccttgcttcatgccgcggcgcggttgctcgat
accgatgaactgacctccgcggcgcggcgcacactgggcaatttcgtgaccgatgtcgcg
cgctggcgggaccgcgccaacgatcttccgcatgcggagcttgcccggctgatcctcgat
gaatcgggctataccggcgtgctgcaggcggaaaagagcgtcgaggcgtcgggccggctg
gaaaatctcaacgaactcatccgtgcgatggaggaatatgagacgctcggtgccttcctc
gaacatgtcagcctcgtcatggacaatgacgccgcggtcgaggacgccaaggtgacggtg
atgacgatccacgccgccaaggggctggagttcgacaccgtgttcctcgccgggtgggag
gaaggcgtgttcccctcgcagcgcgcgctcgacgaaggcggccttgccagtctcgaggag
gaacgccgcctcgcctatgtcgcgatcacgcgcgcgcgccgccgtgcggcgatcctgcac
gccgccaaccgtcgcatatatggccagtggacgagttcgattccgtcgcgcttcgtcggc
gaactgcccgaggcgcatgtccaggccgaaagcagcatgtcgggcggcgaaagcctgtgg
cgggccaactggtccgaacatgccgatccgttcagcagtgtcgcgcgcagcaccggccgc
ggccccggctggcagcgcgcggcgacgacgggatcattcagccgagagccggcgcgtgtc
gtcgaggcacgtgcgagcgcggtcagcctgggcaacaaggggcgcagcgacctccaatgc
ggcatgcgcgtgttccaccagaagttcggctacggggcgatcgtcgagatcgaaggcaac
aagctggagatcgatttcgagacggcgggccgcaagcgggtgatggacagcttcgtcacc
atcccgggctga
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