Sphingomonas sanxanigenens: NX02_11710
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Entry
NX02_11710 CDS
T03929
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
ssan
Sphingomonas sanxanigenens
Brite
KEGG Orthology (KO) [BR:
ssan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ssan03016
]
NX02_11710
Enzymes [BR:
ssan01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
NX02_11710
Transfer RNA biogenesis [BR:
ssan03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
NX02_11710
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
AHE54051
UniProt:
W0AAE2
LinkDB
All DBs
Position
2422899..2424080
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AA seq
393 aa
AA seq
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MEIHPLIEDSQTLADLCTRLAKSPFVAVDTEFMRENSYWPELCLIQISDGKEAAAIDPMA
KGIDLKPLLDLLVENEDVLKVFHAGGQDIEIVHNLTAKTPYPMFDTQIAAMALGQGEQVG
YSNLVDNYLGITLDKGARFTDWSRRPLDRRQIDYAIADVTHLAKIFPRMLDKLRKTGRGD
WLDQEMERIGDPSNYVNDPEEAWQRVRIQGRKPEVLGRLKALAAWREREAQGKNLPRGRI
VKDETLADVAAHPPRQQADLAKVRGLSASWATNDIGGRLMAAIAAAQPMPATDLPPRDDR
KPGLGKDGGLVADLLKLLLKIRARDISVAPRLLARSEELELLAAGVRDDLAILDGWRYDQ
FGRDALALVEGRLGFAVKGGKLKMNRIGEEATP
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atggaaattcaccctcttatcgaagacagccagacgcttgcggacctctgtacccgtctc
gccaagtcgccgttcgtcgccgtcgataccgaattcatgcgcgagaacagctattggccg
gaactttgcctgatccagatctccgacggcaaggaggccgccgcgatcgatccgatggcg
aaaggcatcgatctcaagccgctgctcgacctgctcgtcgagaatgaggatgtgctcaag
gtcttccatgccggcgggcaggacatcgaaatcgtccacaatctcacggcgaagacgccc
tacccgatgttcgacacgcagatcgcggcgatggcgctgggccaaggcgagcaggtcggc
tattccaacctggtcgacaattatctgggcatcacgctcgacaagggcgcgcgcttcacc
gactggtcgcgccgcccgctcgaccggcgccagatcgactatgcgatcgccgacgtcacc
cacctcgccaagatcttcccgcgcatgctcgacaagctgcgcaagaccgggcgcggcgac
tggctggatcaggagatggagcggatcggcgatccctccaactatgtgaacgaccccgag
gaagcgtggcagcgcgtccgcatccagggccgcaagcccgaggtgctgggccggctgaag
gccctggcggcgtggcgcgagcgcgaggcccaaggcaagaacctgccgcgcggacgcatc
gtcaaggacgagaccttggccgacgtcgcggcgcatccgccgcgccagcaggcggacctc
gccaaggtgcgcgggctctcggcaagctgggcgaccaacgatatcggcggccggctgatg
gccgcgatcgccgctgcccagccgatgccggcgaccgacctgccgccgcgcgacgatcgc
aagccggggctcggcaaggatggcgggctcgtcgccgacctgctcaagctgctgctcaag
atccgcgcgcgcgatatcagtgtcgcgccacgcctgctcgcccgcagcgaggaactggaa
ctgctggccgccggcgtgcgcgacgacctcgcgatcctcgatggctggcgctacgatcag
ttcggccgggatgcgctggcgctggtcgaagggcggcttggtttcgcggtcaagggcggt
aagctgaagatgaaccgcatcggagaggaagccacgccatga
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