Sphingomonas sanxanigenens: NX02_12150
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Entry
NX02_12150 CDS
T03929
Name
(GenBank) hypothetical protein
KO
K16137
TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
Organism
ssan
Sphingomonas sanxanigenens
Brite
KEGG Orthology (KO) [BR:
ssan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssan03000
]
NX02_12150
Transcription factors [BR:
ssan03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
NX02_12150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_N
TetR_C_13
EthR_C
TetR_C_13_2
TetR_C_11
TetR_C_6
DUF6202
Motif
Other DBs
NCBI-ProteinID:
AHE54132
UniProt:
W0AC77
LinkDB
All DBs
Position
2504241..2504885
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AA seq
214 aa
AA seq
DB search
MNLTKKAQVTRQHILDTGYRLVLHRGFAAMGLMEILKECGVPKGSFYHYFASKEAFGCAL
LQQYVDEYIEKLARLLAETGNGRESLMRYWNAWIADPTSSSDSANPVQGWADDCLVVKLA
AEVADLSEDMRRVLDAGVQQLLARIAALIDEAREDGSVPDGAPSPALARMLYQMWLGAAL
LTKLSQNRMPLHQALIATETLLACDQTPPNVPIT
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atgaacctgaccaaaaaagctcaagttaccaggcaacatatcctcgacacggggtatcgg
ctcgtgctgcacagggggttcgctgcaatgggcctgatggaaatcctcaaggaatgtggc
gtccctaaagggtcgttctatcactactttgcgtcgaaggaggcctttggctgcgcgcta
ttgcaacagtacgttgacgaatacattgaaaagcttgctcgcctgctcgcggagacaggc
aatggacgtgaaagtcttatgcggtactggaatgcctggatcgccgatccgaccagttca
tctgattcggccaatccggtgcaagggtgggccgatgattgtctggtggtgaagctcgcc
gcagaggtggctgacctatccgaagacatgcgccgcgtgctcgatgcgggcgttcaacag
ttgctggcgagaattgccgcattgatcgacgaagcccgcgaagacggctcagtgcccgat
ggtgcgccgtcacctgcgctggcgcgaatgctgtaccagatgtggctgggtgccgcgcta
ctcaccaaactcagccagaacaggatgccactacatcaggccctgattgccacggaaacc
ctgctcgcctgtgatcaaacgcccccaaatgttccgatcacgtaa
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