Sphingomonas sanxanigenens: NX02_13340
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Entry
NX02_13340 CDS
T03929
Name
(GenBank) hypothetical protein
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
ssan
Sphingomonas sanxanigenens
Brite
KEGG Orthology (KO) [BR:
ssan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssan03019
]
NX02_13340
03009 Ribosome biogenesis [BR:
ssan03009
]
NX02_13340
03036 Chromosome and associated proteins [BR:
ssan03036
]
NX02_13340
Enzymes [BR:
ssan01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
NX02_13340
Messenger RNA biogenesis [BR:
ssan03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
NX02_13340
Ribosome biogenesis [BR:
ssan03009
]
Eukaryotic type
90S particles
RNase
NX02_13340
Prokaryotic type
rRNA processing factors
NX02_13340
Chromosome and associated proteins [BR:
ssan03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
NX02_13340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
AHE54364
UniProt:
W0A8W4
LinkDB
All DBs
Position
2746637..2747302
Genome browser
AA seq
221 aa
AA seq
DB search
MAADLSSWIRETFQHEPGDLALFERALTHGSQSTLNYERLEFLGDRILGLLVARWLFVLF
PDEPEGKLSRRLNALVSGGTCAEIGRAIGVPTHLRLGKQARDDGANDSDNVLGDVVESLI
AAVFLEGGLEAADRFVRSAWGDRVLQQQRAPLHPKSALQEWAAAHNRRPPVYEITNRAGP
HHAPRFTITVTIKGAGEASAEGSSKQDAETAAARALLEKLQ
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atggcagccgatctttcctcctggatcagggagaccttccagcacgaacccggcgacctc
gcgctgttcgaacgcgcgctgacgcatggtagccagagcaccctcaactatgagcggctc
gaatttctcggtgaccgcatcctcggcctgctggtggcgcgctggctgttcgtgctgttt
cccgacgagcccgaggggaagctctcgcgccggctcaacgcactcgtctcgggcggcacc
tgtgccgagatcggccgcgcgatcggcgtgccgacgcatctgcgcctcggcaagcaggcg
cgcgacgatggcgcgaacgacagcgacaatgtgctgggcgacgtcgtcgagtcgctgatc
gccgccgtcttcctcgaaggcgggctcgaggccgccgaccgcttcgtccgcagcgcgtgg
ggcgaccgcgtgctgcagcagcagcgtgcgccgctgcaccccaagtccgcgctgcaggaa
tgggccgcggcgcacaaccggcgcccgccggtctatgaaatcaccaatcgcgccgggccg
caccacgcgccccgtttcaccatcaccgtcacgatcaagggtgccggcgaggcctccgcg
gaaggatcgtcgaagcaggatgcggaaaccgcggcggcgcgcgcccttctggagaaactg
caatga
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integrated database retrieval system
