Sphingomonas sanxanigenens: NX02_19125
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Entry
NX02_19125 CDS
T03929
Name
(GenBank) hypothetical protein
KO
K07516
3-hydroxyacyl-CoA dehydrogenase [EC:
1.1.1.35
]
Organism
ssan
Sphingomonas sanxanigenens
Pathway
ssan00071
Fatty acid degradation
ssan00362
Benzoate degradation
ssan00650
Butanoate metabolism
ssan01100
Metabolic pathways
ssan01120
Microbial metabolism in diverse environments
ssan01200
Carbon metabolism
ssan01212
Fatty acid metabolism
Module
ssan_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
ssan00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
NX02_19125
09103 Lipid metabolism
00071 Fatty acid degradation
NX02_19125
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
NX02_19125
Enzymes [BR:
ssan01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
NX02_19125
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Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
ApbA
F420_oxidored
Shikimate_DH
Motif
Other DBs
NCBI-ProteinID:
AHE55489
UniProt:
W0AC80
LinkDB
All DBs
Position
complement(4051026..4053077)
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AA seq
683 aa
AA seq
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MPAITTRRDGDVLIVTSDNPPVNALSADVRQGLAAAIAEAEGDPQVKAVVIAAAGRTFFA
GADITEFGKPPREPGLPAVIDAIEASGKPVVAAIHGTALGGGLEVALGCHYRIAAASAKL
GLPEVKLGLLPGAGGTQRLPRVVGVEPALAMIVTGDPIPAKKAAAIGLVDALVADDLLLA
EAIAFARAVADKDAHPVASTRADRIAGADAATFAAFRKANARRLKGFEAPEACIQAVEAA
VALPYAEGVAKERALFLKLMNGTQSRALRHLFFAERAAAKIDGLPADTQTLPIAKVGILG
AGTMGGGIAMNFLTAGIPVTIIEREQAALDRGIAIIRKNYEASAAKGRMTAEAVEKAMGN
LAGSLDYADLADCDLVIEAVFELMEIKKEVFGRLDAIVKQGAILATNTSYLDVDEIAAAT
SRPEAVIGLHFFSPANVMKLLEIVRGAKTAPAVLATCMGLARRIGKIAVVSGVCHGFIGN
RMLSPRQREANALLMEGARPVDVDRVLLDFGFPMGPFQMADLAGLDIGWDPAKSNGETLR
DRLCEAGLRGQKNGRGFYDYDASRNRTPSAEAEAIIADFAAKAGTEQRSISDEEILERLL
YPMVNEGALILEEGIAQRASDIDIVWLNGYGWPAWTGGPMFWADTIGLDTVVAGLEKHAA
RMPALRVSELLKARAAKGETFNG
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcgataaccacgcgccgcgacggcgacgtcctgatcgtcacctcggacaatccg
ccggtgaacgcgctctccgcggatgtccggcaggggctggccgcggcgattgccgaagcg
gaaggcgacccgcaggtgaaggcggtggtgatcgccgcggccggccgcaccttcttcgcc
ggtgccgacatcaccgaattcggcaagccgccgcgcgaacccggcctgcctgcggtgatc
gacgcgatcgaggcgagcggcaagccggtggtcgccgcaatccatggcaccgcgctcggc
ggggggctggaggtcgccctgggctgccattatcgcatcgctgccgcatcggcgaagctc
ggcctgcccgaggtcaagctggggctgctgcctggcgccggcggcacgcagcggctgccg
cgcgtggtcggcgtcgaaccggcgctggcgatgatcgtgacgggcgatccgatcccggcg
aagaaggctgcggcgatcgggctggtcgacgcgctggtcgcggacgatctgctgctcgcc
gaggcgatcgcctttgcgcgcgccgtcgccgacaaggacgcgcatccggtcgcgagcacg
cgcgccgatcgcatcgccggcgcggatgccgccaccttcgccgcgttccgcaaggccaac
gcgcggcggctgaagggcttcgaggcgccggaagcctgcatccaggcggtcgaggcggcg
gtggcgctgccctatgccgagggcgtggcgaaggagcgtgcgctgttcctcaagctgatg
aacggtacccagtccagggcattgcgccacctgttcttcgccgagcgcgcggcggccaag
atcgacgggctgcccgccgacacgcagacgctgccgatcgcgaaggtgggcatcctcggt
gccggcacgatgggcggcggcatcgcgatgaacttcctgaccgcgggtatccccgtgacg
atcatcgagcgcgagcaggccgcgctcgatcgcggcatcgccatcatccgcaagaattac
gaggcgagcgcggccaaggggcggatgaccgccgaggcggtggaaaaggcgatgggcaac
ctcgccggttcgctcgattatgccgacctcgccgattgcgacctcgtgatcgaggcggtg
ttcgagctgatggagatcaagaaggaggtgttcggccgcctcgacgccatcgtcaagcag
ggcgcgatcctcgcgaccaatacgagctatctcgacgtcgacgagatcgccgcggcaacc
agccggccggaagcggtgatcggcctacatttcttctcccccgccaacgtcatgaagctg
ctcgagatcgtgcgcggggcgaagaccgcgccggcggtgctggcgacctgcatggggctg
gcacgcaggatcgggaagatcgcggtcgtctcgggcgtctgccacggcttcatcggcaac
cgcatgctgtcgccgcgccagcgcgaggccaatgcgctgctgatggaaggcgcgcggccg
gtcgatgtcgatcgcgtgctgctcgatttcggcttcccgatggggccgttccagatggcc
gatctcgccgggctcgacatcggctgggatccggcgaaatcgaacggcgagacgctgcgg
gaccggctctgtgaagcgggcctgcgcgggcagaagaacggccgcggcttctacgattat
gacgccagccgcaaccgcaccccctcggccgaggctgaggcgatcatcgccgacttcgcc
gcgaaagcgggcacggaacagcgcagcatttccgacgaggagatcctggagcggctgctc
tacccgatggtcaatgaaggcgcgctgatcctcgaagaggggatcgcgcagcgtgcctcg
gacatcgatatcgtctggctcaacggctatggctggccggcctggacgggcggcccgatg
ttctgggcggatacgatcggcctcgataccgtcgtcgcggggctggagaagcatgccgcg
cggatgccggcactgcgcgtttccgagctgctgaaggccagggcagcgaagggcgagacc
ttcaatgggtga
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