Sphingomonas sanxanigenens: NX02_22685
Help
Entry
NX02_22685 CDS
T03929
Name
(GenBank) oligogalacturonate lyase
KO
K01730
oligogalacturonide lyase [EC:
4.2.2.6
]
Organism
ssan
Sphingomonas sanxanigenens
Pathway
ssan00040
Pentose and glucuronate interconversions
ssan01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ssan00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
NX02_22685
Enzymes [BR:
ssan01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.6 oligogalacturonide lyase
NX02_22685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase22
Tricorn_N
PD40
Beta-prop_THOC3
Motif
Other DBs
NCBI-ProteinID:
AHE56155
UniProt:
W0AKF2
LinkDB
All DBs
Position
complement(4736252..4737598)
Genome browser
AA seq
448 aa
AA seq
DB search
MTKGKIMRRFGLFALALALAPTALPSAARAEPVKEWVDALTGHRIVQISREAGSASLYFH
QNSYTPQGDKMVISVPDGIAVVTLADWGVKPLVTGKDLQLLFTGRKTRTAYYASGPRNDG
GGAKTIFGVDIDTGKVRRIATVERGSIGSINADETLLLGQWAASEKPLQPDGTQKQGGQP
EIRQPFGQAHYAANGPDGKPLSFAEAKEVRLNERLEAKIPMEIFTIDIRTGARKVVVAST
DWLNHVQFSPTDPNLIMYCHEGPWHKVDRIWTVRTDGSANTLVHKRMMNMEIAGHEFFSP
DGKWIWYDLQTPRGEVFWLAGYEIATGKRKWFALDRNLWSVHYNQSPDRKIFSGDGGDSE
MVAHAPDGKYLYLFTPKDVPDVAGIHAENSETLISPGTFVPEKIVDMRKHDYRLEPNITF
TPDGKWMVFRSNMEGANHIYAVEVKGTK
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaaggaaagataatgcgccgctttggcctgttcgctctcgcgctggcgcttgcg
ccgactgccctgccgtccgccgcacgagccgagccggtgaaggaatgggtggatgcgctg
accggccaccgcatcgtgcagatcagccgcgaggcgggtagcgccagcctctatttccac
cagaacagctatacgccgcagggtgacaagatggtgatctcggtgccggacggcattgcg
gtcgtcacattggcggactggggcgtgaagccgctggtgacgggcaaggatctccagctg
ctcttcacaggccgcaagacgcgcacggcctattatgccagcggtccgcgcaacgatggc
ggcggcgcgaagacgatcttcggcgtcgatatcgacactggcaaggtgcgcaggatcgcg
acggtggagcgcggctcgatcggctcgatcaacgcggacgagaccttgctgctcggccag
tgggcggcgagcgaaaagccgctgcagcccgatggcacgcagaagcagggcggccagccc
gagatccgccagccgttcggccaggcgcattatgccgccaacgggccggacgggaagccg
ttgagcttcgccgaggcaaaggaagtgcggctgaacgagcggctggaagcgaaaatcccg
atggagatcttcacgatcgacatccgcaccggcgcgcgcaaggtggtggtcgcctccacc
gactggctcaatcacgtccagttctcgccgaccgaccccaacctcatcatgtattgccat
gaggggccctggcataaggtcgaccggatctggacggtgcggaccgatggcagcgccaac
acgctcgtccacaagcgcatgatgaacatggagattgccggccacgagttcttctcaccc
gatggcaagtggatctggtacgatcttcaaacgccgcgcggcgaggtgttctggctcgcc
ggctacgagatcgccacgggcaagcgcaaatggttcgcgctcgatcgcaatctgtggtcg
gtgcactacaaccagtcgccggacaggaagatcttctcgggcgatggcggcgacagcgag
atggtggcgcacgcgccggacgggaaatatctctacctgttcacgcccaaggatgtgccc
gatgtcgccggcatccatgccgagaacagcgagacgctgatctcgccgggaacgttcgtg
ccggagaagatcgtcgacatgcgcaagcatgactatcggctggagcccaacatcaccttc
acgccggacggcaagtggatggtgttccgctccaacatggaaggcgcgaaccatatctat
gcggtcgaggtgaaggggacgaaatag
DBGET
integrated database retrieval system
