Sphingomonas sanxanigenens: NX02_23125
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Entry
NX02_23125 CDS
T03929
Name
(GenBank) hypothetical protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
ssan
Sphingomonas sanxanigenens
Brite
KEGG Orthology (KO) [BR:
ssan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssan03400
]
NX02_23125
Enzymes [BR:
ssan01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
NX02_23125
DNA repair and recombination proteins [BR:
ssan03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
NX02_23125
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
Motif
Other DBs
NCBI-ProteinID:
AHE56241
UniProt:
W0AGJ5
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All DBs
Position
4847935..4849518
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AA seq
527 aa
AA seq
DB search
MPEPAPVLIFILGDQLSPGIASLRDLSPADAVVLMAEVSEETVYVRHHPKKIALILSAMR
HFAADLREQGWRVDYIELEDPANSGSFTGALAAAVERHRPSEIRIVQPGEWRVQQMIDGW
EARFGLPVRILRDDRFLCSIPAFRRWASRRQALTMEYFYRDMRRQTGLLMDDGQPAGGRW
NYDAENRKTPPRGLNYPAPARFPPDAITRAVLDLVARRFGDHFGALEPFALPVTRAQALA
ALDQFIAAALPDFGDYQDAMVEGQDQLYHSMLSPALNCGLLVAREVAEAAERAWREGRVP
LNAAEGFIRQIIGWREYVRGVYWMHMPDYAEANALGADRPLPEFYWTGETDMRCLAAAVD
VTRREGWSHHIQRLMVLGNFAMLAGVDPKAISDWFLVVYADAYEWVELPNVVGMSQYADG
GLLGSKPYAAGGAYINRMSDHCGRCRFDVKAKTGPDACPFNALYWDFLARHEARFRDNPR
MRTMYATWHRMKPAQQDAYRASAAAFLAGVKPAADGWARAPLSTGVD
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
gtgcctgagcctgcgccggtcctgatcttcattctcggcgaccagttgtcgcccggcatc
gcctcgctgcgcgacctctctcccgccgatgccgtcgtgctgatggccgaggtttcggaa
gagacggtctatgtccggcatcatcccaagaagatcgcgctcatcctttcggcgatgcgc
catttcgccgccgacctgcgcgaacagggctggcgggtggactatatcgagctcgaagat
ccggcgaacagcggcagcttcaccggcgcgctcgcggcggcagtcgagcgtcaccgccct
agcgagatccgcatcgtccagcccggcgagtggcgcgtccagcagatgatcgacggctgg
gaagcgcgcttcggcctgcccgtccgcatcctcagggacgatcgcttcctctgctcgatc
ccggcgttccggcgctgggcctcccgccggcaggcgctcaccatggaatatttctaccgc
gacatgcgccggcagaccggcctgctgatggacgacggccagccggccggcggccgctgg
aactatgacgcggaaaaccgcaagacgccgccgcgcgggctgaactatccggcgcctgcc
cgcttcccgcccgatgcgatcacccgcgccgtgctcgatctcgtcgcgcggcgtttcggc
gatcatttcggcgcactggagccgttcgcgctgccggtcacccgcgcccaggcgctggcc
gcactggaccaattcatcgcggcggcgctgccggatttcggcgattaccaggacgcgatg
gtggaggggcaggaccagctctaccattccatgctgtcgccggcgctcaattgcgggctg
ctggtggcgcgcgaagtcgccgaggccgcggagcgtgcctggcgcgaaggccgggtgccg
ctgaacgccgcggaaggcttcatccggcagatcatcggctggcgcgaatatgtgcgcggc
gtctactggatgcacatgccggactatgccgaagccaacgccctcggcgcggaccggccg
ctgccagaattctactggaccggcgagaccgacatgcgctgcctggccgccgcggtggac
gtcacccggcgcgagggctggtcgcaccacatccagcggctgatggtcctgggcaacttc
gcgatgctcgccggcgtcgaccccaaggcgatttccgactggttcctggtggtctacgcc
gatgcctatgagtgggtggagctgcccaacgtcgtcggcatgagccaatatgccgatggc
ggcctgctcggctccaagccctatgcggcgggcggcgcctacatcaaccggatgtccgat
cattgcggccgttgccgtttcgacgtgaaggccaagaccggcccggacgcctgccccttc
aacgcgctctactgggatttcctggcgcggcacgaggcccgcttccgcgacaatccgcgg
atgcgcaccatgtacgcgacctggcaccggatgaagccggcgcagcaggatgcctatcgc
gccagcgccgccgccttcctggccggcgtgaagccggccgccgatggctgggcgcgcgcg
cctctttcgacaggtgtcgattga
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