Sphingomonas sanxanigenens: NX02_23445
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Entry
NX02_23445 CDS
T03929
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
ssan
Sphingomonas sanxanigenens
Pathway
ssan03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ssan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NX02_23445
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssan03400
]
NX02_23445
Enzymes [BR:
ssan01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
NX02_23445
DNA repair and recombination proteins [BR:
ssan03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NX02_23445
Prokaryotic type
NX02_23445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AHE56304
UniProt:
W0AEG4
LinkDB
All DBs
Position
4925549..4926259
Genome browser
AA seq
236 aa
AA seq
DB search
MADVKLHSSWLEPLRGEFDSPYMHTLKAWLLAEKQAGKRIFPKGGEWFRALDLTPLDAVR
VVILGQDPYHGPGQAHGLCFSVQPDVRIPPSLVNIYKELEADLGIPRARHGFLEHWAQQG
VLLLNSVLTVQMGMAASHQGKGWERFTDAVIRLVNAKPDPVVFMLWGSHAQKKAAAVDSI
DRGGRHLVLKSPHPSPLSAHNGFFGSRHFSQANAFLEQHSRSPIDWALPAMVSAAG
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
gtggccgacgtcaaacttcattcaagctggctcgagccgctgcgcggcgaattcgacagc
ccctacatgcacacgctcaaggcgtggctgctcgccgagaagcaggcgggcaagcgcatc
ttccccaagggcggcgagtggtttcgcgcgctcgacctgacgccgctcgacgcggtgcgc
gtcgtcatccttgggcaggatccctatcacggccccggccaggcgcacgggctgtgcttc
tcggtgcagcccgacgtccgcatcccgccctcgctggtcaacatctacaaggaactggag
gccgatctcggcattccgcgcgcgcgccacggcttcctcgaacattgggcgcagcagggt
gtgctgctgctcaattcggtgctgaccgtgcagatgggcatggccgcctcgcaccagggc
aagggatgggagcgctttaccgacgccgtgatccgcctggtcaacgcgaaacccgatccg
gtcgtcttcatgctgtggggcagccacgcgcagaagaaggcggcggcggtcgacagcatc
gatcggggcggtcgccatctcgtcctgaaatccccccacccctcaccgctgtcagcgcat
aacggcttcttcggcagccggcatttctcgcaggccaatgcctttctggaacagcatagc
cggtccccgatcgactgggccttgcccgccatggtcagcgcggcgggctag
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