Sphingomonas sanxanigenens: NX02_24970
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Entry
NX02_24970 CDS
T03929
Name
(GenBank) hypothetical protein
KO
K24073
RNA polymerase sigma factor CnrH
Organism
ssan
Sphingomonas sanxanigenens
Brite
KEGG Orthology (KO) [BR:
ssan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssan03021
]
NX02_24970
Transcription machinery [BR:
ssan03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NX02_24970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
PhyR_sigma-like
Xre-like-HTH
HTH_30
GerE
HTH_Tnp_ISL3
HTH_28
HTH_23
DUF134
HTH_31
HTH_3
HTH_psq
HTH_1
HTH_29
HTH_17
HTH_10
HTH_24
HOOK_N
Motif
Other DBs
NCBI-ProteinID:
AHE56601
UniProt:
W0AHL7
LinkDB
All DBs
Position
complement(5244714..5245304)
Genome browser
AA seq
196 aa
AA seq
DB search
MTCGLADRSDGELAVLACGGQKAAFGTIVARHKQALHRLVVRLIDDEDEAVDIVQEAFIA
AHAALPRFDPARPMRGWLTRIAVNKARDWRRRRIVRRLISAVLPDDAVEIPDDVPAIDKA
VGDRAELARVNAAIARLPGNLREALVLRAIEGLSQAEAAEALGVSEKTIETRLYRARQRL
KADLDRVDFPARGAKG
NT seq
591 nt
NT seq
+upstream
nt +downstream
nt
gtgacctgcggcctcgccgatcggtcggacggggaactggccgtgctcgcatgcggcggg
caaaaggctgcgttcggcacgatcgtggcacggcacaagcaggcgctgcaccggctggtc
gtccgcctgatcgacgatgaggacgaggcggtggatatcgtgcaggaagccttcatcgcc
gctcacgcggcgctgccgcgtttcgatccggcgcggccgatgcgcggctggctgacgcgc
atcgcggtcaacaaggcgcgcgactggcggcggcggcggatcgtgcgccgcctgatctcc
gcggtgctgcccgacgatgcggtcgagataccggacgatgtgccggcgatcgacaaggcg
gtgggcgatcgcgccgaactggcgcgggtcaacgcggcgatcgcgcggctgccgggcaat
ttacgcgaggcgctggtgctgcgtgcgatcgaaggactctcgcaggcggaagcggccgag
gcgctgggcgtcagcgaaaagaccatcgagacgcggctctatcgcgcgcggcagcggttg
aaggcggacctcgatcgcgtggattttccggcacgcggagccaagggatga
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integrated database retrieval system