Sphingomonas sanxanigenens: NX02_25745
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Entry
NX02_25745 CDS
T03929
Name
(GenBank) DNA polymerase
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
ssan
Sphingomonas sanxanigenens
Pathway
ssan03030
DNA replication
ssan03410
Base excision repair
ssan03420
Nucleotide excision repair
ssan03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ssan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NX02_25745
03410 Base excision repair
NX02_25745
03420 Nucleotide excision repair
NX02_25745
03440 Homologous recombination
NX02_25745
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssan03032
]
NX02_25745
03400 DNA repair and recombination proteins [BR:
ssan03400
]
NX02_25745
Enzymes [BR:
ssan01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NX02_25745
DNA replication proteins [BR:
ssan03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
NX02_25745
DNA repair and recombination proteins [BR:
ssan03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
NX02_25745
NER (nucleotide excision repair)
GGR (global genome repair) factors
NX02_25745
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DprA_N
HHH_5
HHH
Motif
Other DBs
NCBI-ProteinID:
AHE56754
UniProt:
W0AFR7
LinkDB
All DBs
Position
complement(5403610..5406405)
Genome browser
AA seq
931 aa
AA seq
DB search
MARPANRYPAAMASNHLYLVDGSGYIFRAYHRLPPLTNKHNEPVGAVYGYTAMLWKLADE
VHKADGPTHMAVVLDKSSHTFRNDLYDKYKAQRPPPPEDLIPQFPMIRDATRAFSLPCIE
EEGWEADDLIASYAKAALAQGWQVTIVSSDKDLMQLIEPGLDLYDTMNNRRLGAEHVVEK
FGVPPVQLGEVLALMGDSVDNVPGVPGVGPKTAAKLITEHGDLEAVLAAAPDMKKGKLRE
NLIEHAEMARLSRKLVTLACDVPLPEPLDGLALQGIPEAPLRAFLEHHGFRSLLARLGAV
ADAPQPAPAAGVALPEDPPCDHDGYEAVTDLAALERWAAAAREQGFVALDTETDGLGPMA
GLVGISMALAPNRACYVPLGHRGGDLLADTPVQIPIDQALAVLKPMLADPAVLKIGHNIK
YDLSILARHGVVVAPIDDTIVMSFNLDAGRHGHGMDELAATHLAHSCIAFKDVVGTGKAQ
KGFHEIGLREATRYAAEDADVTLRLWRRLKPRLSPEQATRVYEMVDRPLVPVLSGMERAG
IKVDRKTLSRLSAEFATQIAALEGEIHGIAGTPFTIGSPKQLGDVLFEQMGIKGGRKGKS
GVYSTDVNELERIAADREAGAGAELARKVLDWRQLSKLKSTYTDSLQQEINAETGRVHTS
YGLTGAQTGRLSSNDPNLQNIPVRTETGRQIRDAFVAEPGNVILSADYSQIELRLAAHMA
DVPQLRDAFLRGDDIHNMTAQELFGEVNRDTRGRAKTINFAILYGISRWGLAGRLEIAPD
EAQAMIDRYFDRFPGIRTYIAETLSSVRENGFTTTLFGRKTHFTRIKSSVQHERQGAERA
AINAPIQGTSADIIKRAMARMNPALAEAGLSDVRMLLQVHDELVFELPESLVDRAKPVIQ
HVMATAAEPLVKLTVPLGVEIGTGTSWGAAH
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
ttggcgcggccagcaaatcgctatcccgccgccatggcttccaaccatctctatctcgtc
gacggctcgggctatatcttccgggcctatcatcgcctgccgccgctgaccaacaagcac
aacgagccggtgggcgccgtctatggctatacggcgatgctgtggaagctcgcggacgag
gtccacaaggccgacgggccgacgcacatggcggtggtgctcgacaaatcgagccacacc
ttccgcaacgatctctatgacaagtacaaggcgcagcggccgccgccacccgaggatctg
atcccccagttcccgatgatccgcgatgcgacgcgcgccttctccctcccctgcatcgag
gaggaaggctgggaggccgacgatctcatcgccagctatgccaaggcggcgctggcgcag
ggctggcaggtgacgatcgtcagttccgacaaggatctgatgcagctcatcgagccgggg
ctcgacctctacgacacgatgaacaaccgtcggctcggtgccgagcatgtcgtcgagaag
ttcggcgtgccgccggtgcagctcggcgaggtgctggcgctgatgggcgacagcgtcgac
aatgttcccggcgtgccgggggtcggccccaagaccgctgccaagctgatcaccgagcat
ggcgatctcgaagccgtacttgccgccgcgcccgacatgaagaagggcaagctgcgcgag
aacctgatcgagcatgccgagatggcgcggctctcgcgcaagctggtgacgctcgcctgt
gacgtgccgcttcccgagccgctcgatggcctcgcgctgcagggcatccccgaagcgccg
ctgcgtgccttcctcgaacatcatggcttccgctcgctgctcgcgcggctgggtgcggtc
gccgatgcgccgcagccggctccggcggcgggcgttgcgctgcccgaggatccgccctgc
gaccatgacggctatgaggcggtgaccgacctcgccgcactggagcgctgggcggcggcg
gcacgcgaacagggtttcgtcgcgctcgataccgagaccgacgggctggggccgatggca
gggctggtcggcatcagcatggcgctggcgcccaatcgtgcctgctatgtgccgctgggc
catcgcggcggcgacctgctggccgatacgccggtgcagattccgatcgatcaggcgctg
gcggtgctgaagccgatgctcgcggatccggcggtgctcaagatcggccacaacatcaaa
tatgacctctcgatcctggctcgccacggcgtggtggtggcgccgatcgacgataccatc
gtgatgagcttcaacctcgatgccggccgccacggccatggcatggacgagcttgcggcg
acgcacctcgctcacagctgcatcgcgttcaaggatgtcgtcggcaccggcaaggcgcag
aagggcttccacgagatcggcctgcgcgaagcgacgcgctatgccgccgaggacgccgac
gtcaccctgcggctgtggcgccggctgaagccgcgcctgtcgcccgagcaggcgacgcgc
gtctacgagatggtcgaccggccgctggtgccggtgctgtcgggcatggagcgcgccggc
atcaaggtggatcgcaagacgctgtcccgcctgtccgccgagttcgcgacgcagatcgcg
gcgctggaaggcgagatccatgggatcgccggcacgccgttcacgatcggcagccccaag
caattgggcgacgtgctgttcgagcagatgggcatcaagggcggccgcaagggcaagtcc
ggcgtctattcgaccgacgtcaacgagcttgagcgcatcgccgccgaccgcgaggccggc
gcgggcgccgaactggcgcgcaaggtgctcgactggcgccagctctccaagctcaagtcg
acctacaccgactcgctgcagcaggagatcaacgccgaaaccggccgcgtccacaccagc
tacggcctgaccggcgcgcagaccgggcgcctctcgtccaacgatcccaacctgcagaac
atcccggtgcgcaccgagaccggccggcagatccgcgacgccttcgtggcggagccgggc
aatgtcatcctctccgccgactacagccagatcgagctgcggctggcggcgcacatggcg
gacgtgccgcagttgcgcgacgcgttcctgcgcggcgacgacatccacaacatgaccgcg
caggagctgttcggcgaggtcaaccgcgacacccgcggccgggccaagacgatcaacttc
gccatcctctacggcatttcgcgctggggcctcgccggccggctcgaaatcgcgccggac
gaggcgcaggcgatgatcgaccgctatttcgaccgcttccccggcatccgcacctacatc
gccgaaacgctttccagcgtacgcgagaacggcttcacgacgaccctgttcggccgcaag
acgcatttcacccggatcaaatcgtcggtgcagcacgagcggcagggtgccgagcgtgcc
gcgatcaacgcgccgatccagggcaccagcgccgacatcatcaagcgcgcgatggcgcgg
atgaacccggcacttgccgaggccggcctgtccgatgtgcgcatgctgctgcaggtgcat
gacgaactcgtcttcgagcttcccgaaagcttggtggaccgcgcgaagccggtgatccag
catgtgatggcgacggcggccgagcccctggtcaagctcaccgtgccgctgggcgtggag
atcggcaccggcaccagctggggcgcggcgcactaa
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