KEGG   Sphingomonas sanxanigenens: NX02_25985
Entry
NX02_25985        CDS       T03929                                 
Name
(GenBank) helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
ssan  Sphingomonas sanxanigenens
Brite
KEGG Orthology (KO) [BR:ssan00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ssan03400]
    NX02_25985
Enzymes [BR:ssan01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     NX02_25985
    5.6.2.6  RNA 3'-5' helicase
     NX02_25985
DNA repair and recombination proteins [BR:ssan03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    NX02_25985
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr DEAD Helicase_C ResIII Cas3-like_C_2
Other DBs
NCBI-ProteinID: AHE56799
UniProt: W0AFV6
LinkDB
Position
complement(5448421..5450838)
AA seq 805 aa
MSADPPFPPVLADWFAAKGWAPRRHQIDMLEAGRAGAHALLVAPTGAGKTLAGFLPSLVE
LIEQPTGDLHTLYISPLKALAVDVQRNLLTPIGEMGLDIRVETRTGDTPSDRKARQRARP
PQMLLTTPESLSLLLSYPDSFTLLAGVRTVVIDEVHAFATQKRGDLLALSLSRLQAIAPA
MRRVALSATVADPDGYRAWLAPDGDIDTVTKVIGEPGAPADIAILLPEDRVPWSGHSGKY
AAPQVMAEIETHKTSIVFCNTRGLAELIFQELWKENDQKLPIGIHHGSLDREARRKVEAA
MAAGRLRALVATASLDLGVDWGDVDLVVQMGAPKGSSRLLQRIGRANHRLDQASEAVLVP
GNRFEYLEARAALDAVEANELDPDIFRPGALDVLAQHMMACACAAPFDAKAMLEEVRSAL
PYSALDEETFMRVLGFIESGGYALRAYDRFKRLTHGVDGMWRVSHPNFVKQHRLNAGIIV
DAPTLDVRFKNGRKLGTVEEYFASTLSPGDTFFFSGISLEVERIDTADLVVRATARPARI
PTYVGARMPLSTNLARRVRGFLHDRSQWPRFPNDVREWLEMQDRRSVMPTPGQLLVETFP
HEGRHYMVAYSFEGWNAHQSLGMLITRRMETLGLSPIGFVSNDYALACYGLKPITDPARL
FSADILEHEFVEWVQGSALLKRAFREVAVIGGLVERQHPGKRKTGKQVTFSTDLIYDVLR
KYEPGHLLLQAAWADARARMTDVGRLADLLDRAAGTMLHVDLDRVTPLAVPVLVMIGRES
VAQGTADDELLIEAESLAAAAMRAD
NT seq 2418 nt   +upstreamnt  +downstreamnt
atgtccgctgatcccccctttcccccggtcctcgccgactggttcgccgccaagggctgg
gcgccgcggcgacatcagatcgacatgctcgaagcagggcgggccggcgcgcatgcactg
cttgtcgcccccaccggcgcgggcaagacattggcgggcttcctgcccagcctggtcgag
ctgatcgagcagccgaccggcgatctccacacgctctatatctcgccgctcaaggcgctg
gcggtggacgtccagcgcaatctgctgaccccgatcggcgagatggggctcgacattcgc
gtcgagacgcggaccggcgacaccccgtccgaccgcaaggcccggcagcgcgcccggccg
ccgcagatgctgctgacgacgcccgaatcgctcagcctgctgctctcctatcccgacagc
ttcacgcttctcgccggcgtgcggacggtggtgatcgatgaggtccacgccttcgccacg
cagaagcgcggcgatctgctcgcgctgtcgctcagccggctgcaggcgatcgctccggcg
atgcgtcgagtcgcgctctccgccaccgtcgccgatcccgacggctatcgcgcctggctg
gcacccgacggcgatatcgataccgtgacgaaggtgatcggcgagcccggcgcgcctgcc
gatatcgccatcctgctgcccgaggatcgcgtgccctggtccggccactcgggcaaatat
gccgcgccgcaggtgatggccgagatcgagacgcacaagaccagcatcgtcttctgcaac
acccgcggcctcgccgagctgatcttccaggaattgtggaaggaaaacgaccagaagctg
ccgatcggcatccaccacggctcgctcgatcgcgaggcgcgccgcaaggtggaggcggcg
atggcggcgggcaggctgcgcgcgctggtcgcgaccgccagcctcgacctcggtgtcgac
tggggcgacgtcgatctcgtcgtccagatgggcgcgcccaagggctcgtcgcggctgctg
cagcggatcggccgcgccaaccaccggctcgaccaggcatcggaagccgtgctcgtgccg
ggcaaccgcttcgaatatctggaagcgcgcgccgcgctcgacgcggtcgaagccaacgag
ctcgatcccgacatcttccgccccggcgcgctcgacgtgcttgcgcagcacatgatggcc
tgcgcctgcgcggcgccgttcgacgcgaaggcgatgctggaggaggtgcgctccgccctc
ccctacagcgcgctcgacgaagagaccttcatgcgcgtgctcgggttcatcgaatcgggc
ggctatgcgctgcgcgcctatgaccgcttcaagcggctgacgcatggcgtcgacgggatg
tggcgcgtcagccatcccaatttcgtcaagcagcaccggctgaacgccggcatcatcgtc
gatgcgccgacgctcgacgtgcggttcaagaacggccgcaagctggggacggtggaggaa
tatttcgcctcgacattgtcgccgggcgacaccttcttcttctccggcatcagcctcgag
gtggaacggatcgacaccgccgacctcgtggtgcgtgccaccgcgcggccggcacgcatt
cccacctatgtcggcgcgcgcatgccgctttcgaccaacctcgcgcggcgggtgcgcggt
tttcttcacgatcgcagccagtggccgcgcttcccgaacgacgtccgcgaatggctcgag
atgcaggaccggcgatcggtgatgccgacaccgggccagctcctcgtcgagaccttcccg
catgaggggcggcactacatggtcgcctacagcttcgaggggtggaacgcgcaccagtcg
ctggggatgctcatcacccgccggatggagacgctggggctgagcccgatcggcttcgtt
tccaacgattatgcgctcgcctgctatgggctgaagccgatcaccgatccggcgcgcctg
ttttccgccgacatcctcgaacatgaattcgtcgaatgggtgcagggatcggcgctgctc
aagcgcgccttccgcgaggtggctgtgatcggcgggctggtcgagcgccagcaccccggc
aagcgcaagaccggcaagcaggtcaccttctccaccgacctgatctatgacgtgctgcgc
aaatatgagcccggccatctgctgctgcaggccgcctgggcggatgcgcgcgcgcggatg
accgatgtcggccgcctcgccgacctgctcgaccgtgccgcgggcacgatgctgcatgtc
gacctcgaccgggtgacgccgctggcggtgccggtgctggtgatgatcgggcgcgagagc
gtcgcgcagggcaccgccgacgacgaattgctgatcgaggccgagtcgcttgcggcggcg
gcgatgcgcgcggattga

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