Sphingomonas sanxanigenens: NX02_26495
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Entry
NX02_26495 CDS
T03929
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
ssan
Sphingomonas sanxanigenens
Pathway
ssan03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ssan00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NX02_26495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssan03021
]
NX02_26495
03400 DNA repair and recombination proteins [BR:
ssan03400
]
NX02_26495
Enzymes [BR:
ssan01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NX02_26495
Transcription machinery [BR:
ssan03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
NX02_26495
DNA repair and recombination proteins [BR:
ssan03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
NX02_26495
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
TmoB
HHH_XRCC3_RpoA
IDH
Motif
Other DBs
NCBI-ProteinID:
AHE56891
UniProt:
W0AIE1
LinkDB
All DBs
Position
5558580..5559644
Genome browser
AA seq
354 aa
AA seq
DB search
MSVNAKNWQELKKPNSLEKKAGGGDPRRKATFIAEPLERGFGLTLGNALRRVLLSSLQGA
AVTSIKIENVLHEFSSLAGVREDVTDIVLNVKQIALKMQGEGPKRLQLSATGPAEVTAGM
IAVSGDIEVMNPELVVCHLDEGATLNMELTADIGKGYVPAASNRPADAPIGLVPVDALYS
PVRQVAYKVENTRVGQELDYDKLTLTVETDGTVTPEDAVAYAARILQDQLQLFVHFDDAI
APVSQPVGVAAQASGETEGDSNQLNRYLLKKVDELELSVRSANCLKNDNIIYIGDLVQKT
EAEMLRTPNFGRKSLNEIKEVLSSMGLRLGMEIPGWPPENIEEMAKKLEQDIMA
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtgaacgccaagaattggcaggaactgaagaagccgaacagcctggagaagaag
gccggtgggggcgatccccgtcgcaaggccaccttcatcgccgagccgctcgagcgtggc
ttcggtctgacgctcggcaacgcgctgcgtcgcgtgctgctgtcgtcgctgcagggggcc
gccgtgacctcgatcaagatcgagaacgtgttgcacgagttctcgtcgctggccggcgtg
cgcgaggacgtgacggacatcgtcctgaacgtcaagcagattgcgctcaagatgcagggc
gaggggccgaaacggctgcagctttcggcgaccggcccggccgaggtgaccgcgggcatg
atcgcggtttcgggcgacatcgaggtgatgaaccccgagctcgtcgtctgccatctcgac
gagggcgcgacgctcaacatggaactgaccgccgacatcggtaagggctatgttcccgcc
gcttccaaccgcccggccgatgcgccgatcggtctggtgccggtggacgcgctctactcg
ccggtgcgccaggtggcctataaggtggaaaacacccgcgtcggccaggaactggactat
gacaagctgacgctgaccgtcgagaccgatggcacggtcacgccggaagacgcggtcgcc
tatgccgcgcgcatcctgcaggaccagctccagctgttcgtccacttcgacgacgcgatc
gcgcccgtctcgcagccggtcggcgtcgccgcccaggcgtcgggcgagaccgaaggcgac
agcaaccagctcaaccgctacctgctcaagaaggtggacgagctcgaactgtcggtgcgc
agcgcgaactgcctcaagaacgacaacatcatctatatcggcgatctggttcagaagacc
gaggcggagatgctgcggaccccgaatttcggccgcaagtcgctcaacgagatcaaggaa
gtcctctccagcatgggcctgcgcctcggcatggagatccccggctggccgcccgagaac
atcgaggaaatggccaagaagctggaacaggacatcatggcctga
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