Sphingomonas sanxanigenens: NX02_26830
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Entry
NX02_26830 CDS
T03929
Name
(GenBank) hypothetical protein
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
ssan
Sphingomonas sanxanigenens
Brite
KEGG Orthology (KO) [BR:
ssan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ssan03016
]
NX02_26830
Enzymes [BR:
ssan01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
NX02_26830
Transfer RNA biogenesis [BR:
ssan03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
NX02_26830
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
AHE56955
UniProt:
W0AML6
LinkDB
All DBs
Position
5621929..5622471
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AA seq
180 aa
AA seq
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MSHTVRYRYLLFAHLSSTARDACAFARDRFVRPAKPVSDPRLHMTIARLAERDDPDPLIG
PRVVEAFQGVELPGFDIGLDRIRMNPDIAMLQGKGNRPALVPLRQPVRDRLPRAGILPYI
SRTEPHVTLGYEIGRNDCQPIEPIRWIADRLDLVESWAGRTVHRTLASWPLVNRQLSFGF
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atgtcccacaccgtccgctatcgctatctgctgttcgcgcatctgagttcgaccgcgcgg
gacgcctgcgcctttgcccgtgaccggtttgtgaggccggccaaaccggtctccgatccg
cggttgcatatgacgatcgcacggcttgccgagcgtgacgatcccgacccgttgatcggg
ccgcgcgtcgttgaagcgttccagggcgtggagttgccagggttcgatatcggtctcgat
cggatccggatgaatcccgatatcgcgatgctgcagggtaagggcaaccggccggcactg
gtcccgctccgccagccggttcgtgaccgcctgccgcgcgctggcatcctgccctatatt
tcgcggacggaaccgcatgtcacgcttggctatgagatcggccgcaacgattgccagccg
atcgagccgatccggtggattgcggaccggctggatctggtggaaagctgggccggccga
acggtgcacaggacattggcgagctggccgctggtgaaccgccagctcagcttcggtttc
tga
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