Sphingomonas sanxanigenens: NX02_28570
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Entry
NX02_28570 CDS
T03929
Name
(GenBank) 3'-5' exonuclease
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
ssan
Sphingomonas sanxanigenens
Brite
KEGG Orthology (KO) [BR:
ssan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ssan03016
]
NX02_28570
Enzymes [BR:
ssan01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
NX02_28570
Transfer RNA biogenesis [BR:
ssan03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
NX02_28570
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AHE57293
UniProt:
W0ALT1
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All DBs
Position
5997177..5997794
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AA seq
205 aa
AA seq
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MTVHFHEEDLPEGVLAPGPIAIDTETMGLITPRDRLCVVQISDGGDDEHLVRFSPGSDYA
APNLRAVLADPERLKLYHFARFDLAAIRQYLGVVAAPVYCTKIASRLVRTYTDRHGLKEL
VRELIGQEISKQQQSSDWGGPDLSDAQREYAASDVRYLHRLRDELDRRLAREGRTGIAQA
CFDFLPARAELDLAGWPEIDIFAHI
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtgcatttccatgaagaagatctgcccgaaggcgtgctcgcgcccgggcccatc
gccatcgataccgagacgatggggctcatcaccccgcgcgaccggctgtgcgtcgtccag
atttccgacggcggcgacgacgagcatctcgtgcgcttctcgcccggcagcgactacgcc
gcgcccaatctgcgcgcggtgctggcggatccggagcgcctcaagctctatcatttcgcc
cgcttcgacctcgccgcgatccgccagtatctgggcgtcgtcgcggcgccggtctattgc
accaagatcgcgtcgcggctggtgcgcacctacaccgaccgccatggactgaaggaactg
gtgcgcgaactgatcgggcaggaaatctcgaagcagcagcagtcgtcggactggggcggc
cccgatctcagcgatgcccagcgcgaatatgccgcgtcggacgtgcgctacctccaccgc
ctgcgcgacgagctcgatcgccggctggcgcgcgaggggcgcaccggcatcgcgcaggcc
tgtttcgattttcttccggcgcgcgccgagctcgacctcgccggctggcccgagatcgat
atcttcgcgcatatctga
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