Spironucleus salmonicida: 94294089
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Entry
94294089 CDS
T10465
Symbol
SS50377_20066
Name
(RefSeq) TBP-interacting protein TIP49
KO
K04499
RuvB-like protein 1 [EC:
5.6.2.4
]
Organism
ssao Spironucleus salmonicida
Pathway
ssao03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ssao00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
94294089 (SS50377_20066)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ssao03036
]
94294089 (SS50377_20066)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ssao03037
]
94294089 (SS50377_20066)
Enzymes [BR:
ssao01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
94294089 (SS50377_20066)
Chromosome and associated proteins [BR:
ssao03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
94294089 (SS50377_20066)
Chromatin remodeling factors
SRCAP complex
94294089 (SS50377_20066)
INO80 complex
94294089 (SS50377_20066)
INO80 complex (yeast)
94294089 (SS50377_20066)
SWR1 complex
94294089 (SS50377_20066)
ASTRA complex
94294089 (SS50377_20066)
Cilium and associated proteins [BR:
ssao03037
]
Motile cilia and associated proteins
Dynein assembly factors
94294089 (SS50377_20066)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TIP49
TIP49_C
AAA
RuvB_N
AAA_22
AAA_16
ResIII
AAA_5
AAA_7
Mg_chelatase
Sigma54_activat
IstB_IS21
Parvo_NS1
Cdc6_lid
AAA_19
DEAD
AAA_18
PhoH
AAA_25
AAA_17
Rad17
DNA_pol3_delta2
CPT
APS_kinase
TsaE
nSTAND3
AAA_28
Motif
Other DBs
NCBI-GeneID:
94294089
NCBI-ProteinID:
XP_067767493
LinkDB
All DBs
Position
1:142894..144216
Genome browser
AA seq
440 aa
AA seq
DB search
MHLQIENIRTDAQTRIDAHSHIKSLENGFIGQVEARNAAQVLTSLIKQKKLAGRSVLFAG
PSGTGKTAIALAIAKELGDVPFHCLIGSEVYSAEVKKSEVLMEAFRRSIGLRIKEDKEVF
EGEVTRMNVAAVEGTGGQVVNRVNIVLQTKKNEQELKLDGNVYQQLQQQNVKVGDVIYIE
ANSGLVKRMGRSDKYVSDNQLEADSYVPVPKGDVHKRKEIVQNVTLHDLDMANAQPKGGQ
DLVSILNQFNKTRKTEITEKLRLEIDKVVQRYVQNGVAELNPGVLFIDECHLLDLESFSF
LNKALESELAPICIFATNRGMCQIRGTEIISPHGIPSDLLDRMLIVRTLPYGKNEIEKII
EKRAEVESIKLQEAALHALGQIGCETSLRYSLQLISIAGIIAKVANLEDVNEESVLEARD
LFLDVKRAQEVVQQQGGYLE
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgcatctttaaatagagaatatcaggactgatgcacagactagaatcgatgctcattct
catattaaatctttagaaaatggttttataggttaagttgaagctagaaatgctgcctaa
gtgctaacatcattaattaagcaaaagaagttagcagggcgctcagttttattcgcaggg
ccatctggtactggaaaaactgctatagcattagctatagcaaaggagctaggcgatgtt
ccttttcattgtcttattggttcagaagtttactcagctgaagttaaaaaatcagaggtg
ttaatggaagctttcagaagatcaattggcttacgtataaaagaggataaagaagtattt
gaaggagaagttaccaggatgaatgttgctgcagttgaaggaacaggaggataagttgta
aatcgtgttaacattgttctttaaactaagaagaatgaacaagaattaaagttggatgga
aatgtttatcaataattataataatagaatgtaaaagttggtgatgttatttatatcgag
gcgaactcaggcttagtaaagcgtatgggtcgttctgataaatatgtctcggataaccaa
ttagaagcagattcttatgtaccagtacctaaaggtgatgttcataaacgtaaagaaatt
gtttaaaatgtaacccttcatgatcttgatatggctaatgctcaaccaaaaggaggacaa
gatctggtatctattttaaattaatttaacaaaacaagaaagacagagataactgaaaaa
ttaaggctagaaattgataaagtagtataacgttatgttcaaaatggggtggcagaatta
aatcctggtgttttatttattgatgaatgccatcttctagacttagaatcattctccttc
cttaataaggctttagagagtgaattagctcctatttgcatatttgctactaataggggt
atgtgtcaaattcgcgggacggaaataatttctcctcatggcattccttcagatttatta
gatagaatgcttattgtaagaacattaccatacggcaaaaatgaaattgaaaaaattatt
gaaaaaagagctgaggttgaaagcattaaattataagaggctgcattgcatgcattaggt
taaattggttgtgagacatcgttgagatattctttataacttatttcgattgctggaata
atagctaaagtagctaatctagaggatgtgaatgaagaatcagtattagaggctagagac
ttatttttagacgtcaaaagagcataagaagttgtctaataataaggcggatatcttgag
tga
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