Spironucleus salmonicida: 94294100
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Entry
94294100 CDS
T10465
Symbol
SS50377_20077
Name
(RefSeq) Dynein intermediate chain
KO
K10409
dynein axonemal intermediate chain 1
Organism
ssao Spironucleus salmonicida
Pathway
ssao04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
ssao00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
94294100 (SS50377_20077)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ssao03037
]
94294100 (SS50377_20077)
04812 Cytoskeleton proteins [BR:
ssao04812
]
94294100 (SS50377_20077)
Cilium and associated proteins [BR:
ssao03037
]
Motile cilia and associated proteins
Dynein arm
94294100 (SS50377_20077)
Cytoskeleton proteins [BR:
ssao04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
94294100 (SS50377_20077)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_RIG_2nd
WD40_Prp19
WD40_RFWD3
WDR55
Beta-prop_HPS5
WD40_WDHD1_1st
EIF3I
Beta-prop_WDR35_TULP_N
WD40
ANAPC4_WD40
Beta-prop_TEP1_2nd
Beta-prop_BBS7
Beta-prop_TEP1_C
PglD_N
Motif
Other DBs
NCBI-GeneID:
94294100
NCBI-ProteinID:
XP_067767504
LinkDB
All DBs
Position
1:complement(160807..162885)
Genome browser
AA seq
692 aa
AA seq
DB search
MPPKPTQKVTASMKPGTTLESGIVDLQVEVPKIQLTEEINRILQATNPNAPQQLIRYNYQ
QKQFKMDPNAGATHFHVEIDGSYVFNDENYYNAFEDNQEKLLFNQFNFSNRGTQTFNVPP
RIMNIQTQQFEVGFTKGQLSKSIIYDLYKVDKKKNVVQEDAALVANTQNPFEFAGHEGYV
EPKIAESATTVKTEDNKISALSTLPDESIKKIVTSLNLSEKLIAQSAFSEVVTDFAAWND
PADQYKPQEGSLYPLWKFSQSTSIPVSGIVWHPKYKDVFAVSYGVNQPTSTTFTPGLVCI
FSLKNPFYSEKQIKTHCDVICTSWNEDDENLLLVGLVDGNVQIWDLENTPACVAQSSTHT
KKHLTAVTGVKWRKDSDKELGLQQFLSVSSDGQVFAWAFVQGDLRVVFQVTITDSGFAND
VGVVNKVKKQSVSNVSQQNQKSQLQSDATILIAPKQDSNEQHDSAFTPVTGLTSIKLNWE
QPWLYTIGTETGMLRICSTAYLTNFIQSFNLQSNGHSMPITEITWNKYRSDLVATSSEDY
LIKIWQMQRPTPIFTYDLQAPVVACQFSRDVSSVLVAATSANTIHIFDFDQKKESEVCVQ
VVVPDDARLTKMCMNDYYPVIAVGDNKGVVRVFKLSPNLRKRSVYMPIKSKTGIVQQFTP
EQIKETEMEMEMKKLEDYINWCEKCNAASGVE
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgcctcctaagccaactcaaaaagttacagcatcaatgaaacctggaacaactttggaa
tcaggtattgttgatttataagttgaagtacctaaaatttagcttactgaagaaatcaat
cgtattctttaagctactaatcctaacgcaccataacagcttattagatataactatcaa
taaaagcaatttaaaatggatcctaatgcaggagctactcattttcatgttgaaattgat
ggaagctatgtattcaatgatgaaaactattataacgcatttgaggacaattaagaaaag
ctactattcaattaatttaatttttctaacagaggaacctaaactttcaatgtacctcca
agaataatgaatatttaaacataataatttgaagtaggcttcactaaaggtcaattatct
aaatctatcatttacgatttatataaagttgataagaaaaagaatgtggtataagaagat
gctgctttggttgctaatacttaaaatccatttgaatttgcaggtcatgaaggttatgta
gaaccaaaaattgctgaaagtgcaacaacggtaaaaacagaagataataaaatttcagca
ttatctactctacctgatgaaagcattaaaaagatagtaacaagtctgaatttgagcgaa
aaattaattgcacaatctgcattttctgaggttgtaacagactttgcagcttggaatgat
ccagcagattagtataagccgcaagaaggtagcttgtatccattatggaaatttagttaa
agtacgtcaatacctgtttcaggaattgtttggcacccaaaatataaggatgtttttgct
gtcagttatggtgttaattaacccacaagtactacattcactcctggcttagtttgcata
ttttcccttaaaaatccattttattctgaaaaataaatcaagactcattgtgatgtaatc
tgtacatcatggaatgaagatgacgaaaatttattactagttggtcttgtagatggaaat
gtttaaatttgggatttagaaaatacacctgcttgcgtagcctaatccagtacacacact
aaaaaacatttaactgctgttacgggggttaaatggagaaaggattctgataaggagtta
ggcttataataatttttatctgtatcttctgatgggcaagtattcgcatgggcttttgta
taaggagatttacgtgttgtattttaagtcactattacagattctggatttgctaacgat
gttggtgttgttaataaagttaagaaataatctgttagcaatgtttctcagtaaaactaa
aaatcataactttagtctgatgcaactattttgattgcacctaaacaagacagcaatgaa
taacatgattcggcatttactcctgtaactggattaactagtattaaacttaattgggag
taaccttggctatatacaattggtaccgaaactggcatgcttcgtatttgttctactgcg
tatttaactaatttcatttaatcattcaatttataatctaatggtcattctatgccaatt
acagaaataacttggaataaatatagatcagatttagttgctacatcatctgaagactat
ttaattaaaatatggcaaatgtaaagacctactcctatttttacatatgatttataggct
ccagtggttgcatgttaattctctagggatgtatcatctgtattagttgcagcaacatct
gctaatactattcatatttttgatttcgattaaaagaaagagtccgaggtttgtgtctaa
gtagttgttccagatgatgctagattaacaaagatgtgcatgaatgattactatccggtt
attgcagttggtgataataaaggtgtagtccgtgtctttaaattaagtcctaatttacgt
aaacgctcggtttatatgccaattaaatctaaaactgggatagtttaatagtttactcca
gaataaattaaagagacggaaatggaaatggaaatgaagaaacttgaagattatatcaat
tggtgtgaaaaatgtaatgctgcatctggtgtagaatga
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