Spironucleus salmonicida: 94296192
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Entry
94296192 CDS
T10465
Symbol
SS50377_22169
Name
(RefSeq) tRNA pseudouridine synthase
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
ssao Spironucleus salmonicida
Brite
KEGG Orthology (KO) [BR:
ssao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ssao03016
]
94296192 (SS50377_22169)
Enzymes [BR:
ssao01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
94296192 (SS50377_22169)
Transfer RNA biogenesis [BR:
ssao03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
94296192 (SS50377_22169)
Prokaryotic type
94296192 (SS50377_22169)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
94296192
NCBI-ProteinID:
XP_067767378
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All DBs
Position
2:complement(1759939..1760940)
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AA seq
333 aa
AA seq
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MKLQYYLLVVAYKGQHFHGSQIQNSQQPTRTVEQVLFDALAASKLSENPQKANFKRVSRT
DSGVSACQAAFSLFLKMSDQNLQIFKSLLPNDIRFLSLQRVCKSFDPLKYCTGRNYAYYI
PSYLLLSTLPSIDDPTLQQQADFNRLSPLDRLNMLQEILETSLSFFNFAPFSSLPNAKNT
REFIRKITHFRVTQSGNFYKISISGQGFFKHHIRRLIFGIILVSNFKISIYTFQSLFDWR
VGRQEIQRVPGQFLVLERQEFVGCDKHVNFGHLQLDVVKDTIFEEGKQFIGEFWLDNEWK
CPELEHFNVQIDYGYFYELARRSKLLEENIGTI
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgaaactacaatattaccttctagtagtcgcttacaaaggccagcattttcatggttcc
tagatctaaaacagttaatagccaactagaactgttgaataggtactttttgatgcacta
gcagcatcaaaactgtccgaaaatcctcaaaaagctaacttcaaacgcgtatcccgtact
gattcaggtgtgtcagcctgttaagcagcattttcgttatttcttaagatgtcagactaa
aatctataaattttcaagtctcttctccctaatgatattagattcctttctctccaacgc
gtttgtaaatcgttcgatccattgaaatattgtactggtcgaaactatgcatactatatc
ccatcataccttctattatcgaccctaccatcaattgatgaccctaccttataatagcaa
gccgatttcaacagactctcgcctttagatcgcttaaacatgctttaagaaattctcgag
acctcgctatccttttttaattttgcaccattctcttctctcccaaatgcaaagaataca
cgtgaatttataagaaaaatcacacattttcgtgtgacttaatcaggaaatttctacaag
atctctatttccggtcaaggtttttttaagcatcatattagacgccttatctttgggatt
atactagtttcaaacttcaaaattagtatttatacgtttcagagtttgttcgattggcgt
gtagggcgtcaggaaatataacgggttcctggataatttttggttctagaacgctaggaa
ttcgttgggtgtgacaagcatgtgaattttggtcatttgtagctcgatgtagttaaggat
accatttttgaggagggaaaatagtttataggtgagttctggttagataacgaatggaaa
tgcccagagttagagcattttaatgtttaaatcgattatggctatttctacgagctcgca
agaagaagtaaattattagaggaaaatatcgggacgatttga
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