Spironucleus salmonicida: 94296218
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Entry
94296218 CDS
T10465
Symbol
SS50377_22195
Name
(RefSeq) ATP-dependent RNA helicase
KO
K13181
ATP-dependent RNA helicase DDX27 [EC:
5.6.2.7
]
Organism
ssao Spironucleus salmonicida
Brite
Enzymes [BR:
ssao01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
94296218 (SS50377_22195)
Spliceosome [BR:
ssao03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
94296218 (SS50377_22195)
Ribosome biogenesis [BR:
ssao03009
]
Eukaryotic type
Pre-60S particles
Helicases
94296218 (SS50377_22195)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
94296218
NCBI-ProteinID:
XP_067767404
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Position
2:1802827..1804485
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AA seq
552 aa
AA seq
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MSWKQFKLSQQLLTNIISLGWETPTQVQFQSIPLALTSRDILVSSHTGTGKTGSFLIPLI
QRISLQTQQRRTQVLILSPTRELAEQTFKVAQLLGDKISTVALITSSGPVRAQEIVLSSC
PQIVIATPGRLIDHIMNSLFMVNDIEVLVLDECDKMLELGFYKELLEIIKNLPEKRQTLL
FSATAQAVSKIAGEALNKPMLIQVDPVKSIGKNIDQQFIILNNFMGLLDSTLKFHGIGEK
YILKCCIIHQLLEKSLSGQKVIIFCNYKSSVKLLHYFLEKLGSRTIMFSGEMGQQQRTET
INDFNEDFTPIISTDLLSRGIDIKQVDTVIQFEIGAPDSYIHRAGRTGRASLDGVAISIG
YQKEVQILTQQLSKMKFNERVIDMIAFSKILSNIDTNFLEEINISIKEEEIVKQEKEIQR
QIEKTSNIDKYSTEILSSEKRKWMLDTKEKHILQQLKDQVKQGSIKEKDAKQIIQNKGLK
EQQRKLKNIAVAQKRASKNIASRLPEDLKSKIKKQKMEQRNYKGNNGAFNRNEVVKGTSL
VETGKKSKKNGK
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgtcctggaaataattcaagctatctcaataattattaacaaatattatttcattaggt
tgggaaactcctacttaagtataattttagtcaatacctttagcactaacctctagagat
attttagtatcttcacatactggcacagggaaaacaggatcatttcttattccattaatt
taacgtatttctctataaactcagtagcgtagaacttaagttttaattttatctccaacc
agagaactggcggaataaacatttaaggttgcctagttattgggggataaaatatcaacg
gtggcccttattacatcttcaggtccagttagagcctaagagattgtattatcatcttgt
ccataaatagttattgctacacctggaaggcttattgaccatattatgaattctcttttt
atggttaacgatattgaagtattggtattagatgaatgtgataaaatgcttgagctggga
ttctataaagagttattggaaattattaaaaatttaccagaaaaaaggtaaacactatta
ttttcagcaacagcttaagcggttagtaaaattgcaggggaggcattgaataaaccaatg
ttaatataagtggatccagtgaaaagtattggaaaaaatattgatcagtaatttataata
ttgaataattttatgggtttactcgatagtacgttaaaatttcatggtatcggcgagaag
tatattttaaaatgttgcattattcactaattgttagaaaaaagcttatctggataaaaa
gttattatattctgtaattataagagttcagtaaagctcttacattattttttagaaaaa
ttaggttctagaacaattatgtttagtggtgaaatgggttaataataacgcaccgaaact
attaatgattttaatgaagattttactccaattatcagtacagacttattgagtagagga
attgatattaagtaggtggatacagttatatagtttgaaataggcgcgccagattcttat
attcatcgtgcgggaagaacgggaagagctagtttagatggagtagctattagtatagga
tattagaaagaagtttaaattctcacttaatagttaagtaaaatgaaatttaatgaaaga
gttattgatatgatagcattttcaaaaatattgtcaaatattgacactaacttcttagaa
gaaataaacatctcaattaaagaagaggagatagtgaaataagaaaaagaaattcaaaga
taaatagaaaaaactagtaatattgataaatattctacagaaattttatcatcagaaaag
agaaaatggatgttagacactaaagagaaacacattttacaatagttaaaagattaagtt
aaataaggatcaataaaggaaaaagacgcaaaataaattatataaaataaaggcttaaag
gagtagtaacgtaaacttaaaaatattgccgtagcctagaagcgagcatctaaaaacatt
gctagtagattaccagaagaccttaaatcaaaaattaaaaaatagaaaatggaataaagg
aattataaaggtaataatggtgcatttaatagaaatgaagtagtgaaaggaacaagtttg
gttgaaacagggaaaaaaagtaagaaaaatggaaagtga
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