Spironucleus salmonicida: 94296908
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Entry
94296908 CDS
T10465
Symbol
SS50377_22885
Name
(RefSeq) Histone acetyltransferase type B subunit 2
KO
K10752
histone-binding protein RBBP4
Organism
ssao Spironucleus salmonicida
Pathway
ssao03082
ATP-dependent chromatin remodeling
ssao03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ssao00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
94296908 (SS50377_22885)
03083 Polycomb repressive complex
94296908 (SS50377_22885)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ssao03036
]
94296908 (SS50377_22885)
Chromosome and associated proteins [BR:
ssao03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
94296908 (SS50377_22885)
Histone modification proteins
HAT complexes
HATB complex
94296908 (SS50377_22885)
HDAC complexes
Sin3A-HDAC complex
94296908 (SS50377_22885)
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
94296908 (SS50377_22885)
PRC2.2
94296908 (SS50377_22885)
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
94296908 (SS50377_22885)
Heterochromatin formation proteins
Other heterochromatin formation proteins
94296908 (SS50377_22885)
Chromatin remodeling factors
NuRD complex
94296908 (SS50377_22885)
NuRF complex
94296908 (SS50377_22885)
NuRF complex (fruit fly)
94296908 (SS50377_22885)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
CAF1C_H4-bd
WD40
Beta-prop_EML_2
Beta-prop_EIPR1
Beta-prop_EML
EIF3I
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_NUP159_NUP214
WDR55
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
WD40_RFWD3
CFAP43_N
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_ELP1_1st
Motif
Other DBs
NCBI-GeneID:
94296908
NCBI-ProteinID:
XP_067766031
LinkDB
All DBs
Position
3:953080..954201
Genome browser
AA seq
373 aa
AA seq
DB search
MSSSETSHITATFDSFQVFKRNAHSLYDLIISHVLCFPSLTINFPPKTTLKNDQIRVPFT
FSTHTDEQNFIYQQTISLPTPQTSQAQQTISVSSRGVFAGGYGNSDFGLIKPEFFAQIPA
EANFSALSPDGEIIAVSVENSILIFDFHSFLINQNCAPKLTLSHIVSDCFSMVFNEFQLI
CGDSSGKVLIYDINSFSGEILAQCSFGASINGICVSPHFENLILFVTDQGELIFTDFKLK
MLKSVLLGDVIEDFVGTSICWSCFDNNSVTIGGNEGDIIIYNIKENSARKLVKYHTGAIY
QLQYSQFYDLLLAGSEDSRITLWLGGELVFVHAGHTCCVSDARFHPTIPNLIGSVAEDNS
LQFWWPSNLCFEK
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcctctgaaacatcgcatataacggctacttttgactcattttaagttttcaaa
cgaaatgcacactctctgtacgacctgattatatcacatgtcctctgcttcccttccctg
acaattaattttccaccaaagacgacccttaaaaacgatcaaattcgcgttccgttcaca
ttttcgactcacactgacgagcagaatttcatttaccagcagacgatatcgctgccaacg
ccacaaacgtcgcaggcgcagcagaccatttccgtttcctctagaggcgtctttgccggt
ggctacggaaacagcgatttcgggctcataaagcctgaattcttcgcccaaattccagct
gaagcgaacttttcagcgctctcgccagacggagaaattattgcagttagtgtcgaaaat
tctattttgattttcgatttccactcctttttaataaaccaaaattgtgcaccaaaacta
acgctttcgcacatcgtttccgattgtttttcgatggtttttaacgaattttaactcatt
tgtggtgattcgagcggaaaagtccttatttacgacataaactcgttttctggcgagatt
ttggcctaatgctcgtttggagcatcaattaacggcatttgcgtatcgccccatttcgaa
aatttgatacttttcgtcaccgattagggagagcttattttcacagatttcaagctcaag
atgctcaaaagtgtgcttttaggcgacgtaattgaggacttcgttggtacgagcatctgt
tggagctgttttgacaacaattctgttactattggaggcaatgaaggagatataataata
tataatattaaagaaaattccgctagaaaactcgtaaaatatcatactggagcgatatat
tagttacaatatagttaattttatgatttactcttggccggatctgaggattctcggata
acgctgtggctgggcggtgaactggttttcgtgcatgctgggcacacatgctgcgtttcg
gatgcccgtttccaccccacaattccgaatttaatcggcagcgtcgccgaggacaactcc
ttgtagttttggtggcctagcaatttatgtttcgagaagtga
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