Spironucleus salmonicida: 94296950
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Entry
94296950 CDS
T10465
Symbol
SS50377_22927
Name
(RefSeq) SNF7 family protein
KO
K12197
charged multivesicular body protein 1
Organism
ssao Spironucleus salmonicida
Pathway
ssao03272
Virion - Hepatitis viruses
ssao04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ssao00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
94296950 (SS50377_22927)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
94296950 (SS50377_22927)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssao04131
]
94296950 (SS50377_22927)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ssao04147
]
94296950 (SS50377_22927)
Membrane trafficking [BR:
ssao04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-III complex
94296950 (SS50377_22927)
Exosome [BR:
ssao04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
94296950 (SS50377_22927)
Exosomal proteins of other body fluids (saliva and urine)
94296950 (SS50377_22927)
Exosomal proteins of colorectal cancer cells
94296950 (SS50377_22927)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Snf7
PspA_IM30
DUF6565
Motif
Other DBs
NCBI-GeneID:
94296950
NCBI-ProteinID:
XP_067766073
LinkDB
All DBs
Position
3:complement(1007945..1008505)
Genome browser
AA seq
186 aa
AA seq
DB search
MEDLMFNTRFKAKEFQRQAAKFDKEAEKYKQKARAELQKNDKQCASMYATQSSSLKQQAY
QFKLLSVQLETASNQLKMKQAAESFTKEISSLNVSLGKDTANPVEVQKTMDQFQHLMDGL
GVNLAVMQDAMQPAAQITHGDVMQELEAEMVAQSGNDVILSSTKPRIVEDAGADSMNDLM
DRINAI
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atggaagatttgatgttcaacactcgcttcaaggcaaaggaattccagcgccaggccgct
aaattcgacaaggaggccgaaaagtacaagcagaaggcgcgtgccgaactacagaagaac
gacaagtagtgcgcctccatgtacgccacacagtcatcctcgctgaagcaacaggcgtac
cagtttaagcttctctccgtgcagctggaaactgcctctaatcagctcaaaatgaagcag
gcagccgagagcttcacgaaggaaatcagctccctgaacgtctcgctgggaaaagacacc
gcgaacccggtcgaagtacagaagacgatggaccagttccagcacctcatggacggcttg
ggtgtcaacctcgcggtcatgcaggatgcgatgcagcccgctgctcagatcacacacggc
gacgtcatgcaggagctagaagccgagatggtcgcgcaaagcgggaacgatgtcatcctc
agctctacgaagccccgaatcgttgaggatgcgggggctgacagcatgaacgatttgatg
gataggattaatgccatctga
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