Spironucleus salmonicida: 94297029
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Entry
94297029 CDS
T10465
Symbol
SS50377_23006
Name
(RefSeq) Ubiquitin-ribosomal protein L40 fusion protein
KO
K02927
ubiquitin-large subunit ribosomal protein L40e
Organism
ssao Spironucleus salmonicida
Pathway
ssao03010
Ribosome
ssao04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ssao00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
94297029 (SS50377_23006)
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
94297029 (SS50377_23006)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
ssao03011
]
94297029 (SS50377_23006)
04121 Ubiquitin system [BR:
ssao04121
]
94297029 (SS50377_23006)
Ribosome [BR:
ssao03011
]
Ribosomal proteins
Eukaryotes
Large subunit
94297029 (SS50377_23006)
Archaea
94297029 (SS50377_23006)
Ubiquitin system [BR:
ssao04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
94297029 (SS50377_23006)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ribosomal_L40e
Ubiquitin_2
Rad60-SLD_2
Dsc3_N
TBK1_ULD
DUF2604
Ubiquitin_5
OTU1_UBXL
UBL_IKK
Gamma_PGA_hydro
Motif
Other DBs
NCBI-GeneID:
94297029
NCBI-ProteinID:
XP_067766146
LinkDB
All DBs
Position
3:<1123069..>1123452
Genome browser
AA seq
127 aa
AA seq
DB search
MQIFVKTLTGKNITLDVEPTETIQSLKAKIQDKEAIPPDQQRLIFAGKQLEDNRTLSDYN
IQKESTIHLVLRLRGGEMEPTLVALAKKYNQEMLICRNCYARNPVRGTNCRRCHSTSLRK
KKQPKSD
NT seq
384 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcttcgttaagacactcactggcaaaaatatcactctcgatgttgagcctact
gaaaccattcaatctcttaaggctaagatttaggataaggaagctatacctcctgatcaa
taacgtctcatcttcgctggtaagcagttagaagataaccgtactctctctgattataat
atccagaaggaatccactattcatttagttctccgtctcagaggtggtgaaatggaacct
acccttgttgctttagctaagaagtataaccaggaaatgctcatctgtcgtaactgttat
gctagaaatcccgttcgtggtaccaactgccgtagatgccattctacttctctccgcaag
aagaagcagcctaagtctgactga
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