Spironucleus salmonicida: 94297740
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Entry
94297740 CDS
T10465
Symbol
SS50377_23717
Name
(RefSeq) Uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
ssao Spironucleus salmonicida
Pathway
ssao03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ssao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
94297740 (SS50377_23717)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssao03400
]
94297740 (SS50377_23717)
Enzymes [BR:
ssao01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
94297740 (SS50377_23717)
DNA repair and recombination proteins [BR:
ssao03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
94297740 (SS50377_23717)
Prokaryotic type
94297740 (SS50377_23717)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-GeneID:
94297740
NCBI-ProteinID:
XP_067764555
LinkDB
All DBs
Position
4:complement(490425..491135)
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AA seq
236 aa
AA seq
DB search
MESFQSVIDTLNQQSNKEHYCSNADFIPRPGLIFEAFKLVKSPKQVRIVILGQDPYPRKQ
SAAGISFLDLQSSTLADKKQSISMRNIIKAILQHNRLFFNTMNDVRDLIESQFAIKQTKS
YFTALAEDCGILFLNASLTHEDKASVNKHIKFWEPVIAEAFKSICMESPGVVFLLMGEFA
KSYEKYIILGENVRVVKSCHPMMFRFLEENTFEQIKEAEQSLNQGVTDFIKCKIIK
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atggagagtttttaatctgttatagacacgctgaattagtaaagtaataaagagcattat
tgttctaatgcagatttcataccgcgtcctggtctgatttttgaggcatttaaacttgtt
aaatcccctaaacaggtgagaattgtcattctaggtcaagatccgtatccgcgtaaatag
tcagctgctgggatttcttttttagacctataatcttctacattagctgataaaaaacaa
tcgatttctatgcgaaacataataaaagccatactgtaacataataggcttttcttcaat
acaatgaatgatgtaagagatttaatagaatcctaatttgcaataaagtaaacaaagtct
tattttactgcattggctgaagactgtggtattttatttttgaatgcatccctcactcat
gaggataaggcatctgttaataaacatatcaagttctgggagcctgttattgctgaagcg
tttaagtcaatctgtatggaatcaccaggtgtggtatttttgttgatgggtgagtttgca
aaaagttatgaaaaatatattattctgggtgagaatgttagagttgtaaagagttgtcat
ccaatgatgtttaggtttttggaagagaatacatttgagcaaataaaggaagcagaacaa
agcttgaattaaggcgttacggattttattaaatgtaaaataataaagtga
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