Spironucleus salmonicida: 94297748
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Entry
94297748 CDS
T10465
Symbol
SS50377_23725
Name
(RefSeq) ATP-dependent RNA helicase
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
ssao Spironucleus salmonicida
Pathway
ssao03013
Nucleocytoplasmic transport
ssao03015
mRNA surveillance pathway
Brite
Enzymes [BR:
ssao01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
94297748 (SS50377_23725)
Messenger RNA biogenesis [BR:
ssao03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
94297748 (SS50377_23725)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
94297748
NCBI-ProteinID:
XP_067764563
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Position
4:500611..502047
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AA seq
478 aa
AA seq
DB search
MNAKLLSSEQSWDGFGLPQKLVDTLIKNDFKTPSVTQVALYESLKDDAKRSGILEAPTGT
GKTIAFVSHALRQVDASRKIPQVVIFVHTQILGFQILHEVQKLEKQLDITSSLLLGFNAN
LSFNHNAHIIVATPGAFVQNFLPKTSRGKTETAKYKHDFSLIVLDEADYYWKDTNQREAM
VRVFGDLNMCQVLLFSATLDEHVSKKLVQEWLKNQRNPFTVKKEVTLENTSHFFVDFRQN
NESQKLDQLQTIFDLDIYESGFKSIIFCKTRKQVDSTFQKIVELGYEASRYHGDMTQEER
QVEYKKFLAGETRVLITTDMLARGIDIVTIALVINYEVPTEGPQGNEQVATATYVHRIGR
GGRFGRISVAITFVSNDQDMSNMKEIQSYVDKRFNKSGIIQEMKIGQISKTICEVFANQT
AENEEHNDLAILMTGAKGVSTNFKKRSVPNKSGSDSKKAEVEEAKAEIVNDDNEISFE
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccaagctcctttcctctgaacaatcttgggacggttttggccttccttagaag
ctggtagatacattaattaaaaatgacttcaaaacaccttctgtcactcaagttgctctt
tatgaaagcctcaaagatgatgctaagagatctggtattttagaagctcctactggcaca
ggtaagacaatcgcatttgtttcccacgcccttagataggtagatgcatcacgtaaaatt
cctcaggtggtgatctttgttcatactcaaattttaggattttaaattctccatgaagtg
taaaaacttgaaaagtagcttgatattacttcttctttattgttaggttttaatgcaaac
ttaagttttaatcataatgcacatataatagttgcaactcctggagcatttgttcaaaat
ttccttcctaaaacttcaagaggaaaaactgaaacagctaaatataaacacgatttctca
ttaatagttttagatgaggctgattattactggaaagatacgaatcaaagagaagcaatg
gtaagagtatttggtgacttgaatatgtgtcaagttttactattttcagcaactttagat
gaacatgtcagcaaaaaattagtttaagagtggcttaaaaaccaaagaaacccattcaca
gtcaaaaaagaggttacattagagaatacttcacatttcttcgttgactttaggtaaaat
aacgaatcatagaaattagattaactttaaacaattttcgacttagatatttatgaaagt
ggtttcaaaagtatcatattctgcaaaactagaaaacaagtggattccacattttaaaaa
atagtagaattaggttatgaggcttcaagatatcatggtgacatgactcaagaagagcgt
taagttgagtataagaaattccttgctggagaaactcgtgttttaatcactacggatatg
ctcgctcgtggtattgatatagttacaattgctttagtaatcaactatgaagttcccaca
gaaggaccttaaggcaacgagcaggtcgccactgccacatatgttcatagaataggtaga
ggtggtcgttttggtcgtatttcagtagccatcactttcgtgtctaacgattaagatatg
agtaacatgaaagaaattcaatcgtatgtagacaagagatttaacaaatctggaattata
taggaaatgaaaataggacaaatcagcaaaacaatttgtgaggttttcgctaattaaact
gctgaaaacgaagaacataacgacttggcgatcttgatgactggtgctaagggcgtatcc
acgaattttaagaagagaagcgtgcctaacaagtcaggatcagatagtaaaaaagcagaa
gttgaagaagctaaagctgagattgttaacgatgacaacgagatcagttttgagtga
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