Spironucleus salmonicida: 94298089
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Entry
94298089 CDS
T10465
Symbol
SS50377_24066
Name
(RefSeq) TBP-interacting protein TIP49
KO
K11338
RuvB-like protein 2 [EC:
5.6.2.3
]
Organism
ssao Spironucleus salmonicida
Pathway
ssao03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ssao00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
94298089 (SS50377_24066)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ssao03036
]
94298089 (SS50377_24066)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ssao03037
]
94298089 (SS50377_24066)
Enzymes [BR:
ssao01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
94298089 (SS50377_24066)
Chromosome and associated proteins [BR:
ssao03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
94298089 (SS50377_24066)
Chromatin remodeling factors
SRCAP complex
94298089 (SS50377_24066)
INO80 complex
94298089 (SS50377_24066)
INO80 complex (yeast)
94298089 (SS50377_24066)
SWR1 complex
94298089 (SS50377_24066)
ASTRA complex
94298089 (SS50377_24066)
Cilium and associated proteins [BR:
ssao03037
]
Motile cilia and associated proteins
Dynein assembly factors
94298089 (SS50377_24066)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TIP49
TIP49_C
AAA
AAA_16
AAA_22
RuvB_N
Cdc6_lid
NACHT
DnaB_C
NPHP3_N
nSTAND3
Mg_chelatase
AAA_19
Zeta_toxin
NTPase_1
AAA_17
AAA_18
AAA_5
AAA_28
AAA_33
GvpD_P-loop
AAA_14
RNA_helicase
TsaE
AAA_30
SLFN-g3_helicase
PRK
AAA_25
AAA_23
AAA_29
DEAD
AAA_3
MS_channel_2nd
Motif
Other DBs
NCBI-GeneID:
94298089
NCBI-ProteinID:
XP_067764893
LinkDB
All DBs
Position
4:907011..908447
Genome browser
AA seq
478 aa
AA seq
DB search
MTTPLSRIGAHSHVRGLGLSDDLSPESREGLVGQPRARRAAGIVQSLILENKLAGRALLI
SGRPGSGKTALAHALAQSLGSQVPFVGVSASEFFSLEVNQTEALTQAIRRAISVQIPEET
DLIEGEVAMIRIDESANGNGEKVGKVILKTSDMESSFDIGPKMIEMLNKESVRVGDVISI
DKMTGRITKLGRVMSSAQDFDVLAQQTKLLPAPTGELMKRRSVEHVVTLHDMDVINSRSQ
GFLALFSGETGEISNEVRDQVDQKVALWKEEGRATVTSGVLFIDECHILTMEVYSFLNRV
LESEVSPVVIFATNRGYTKIRGTEYLSPFGIPIDLLDRLLIINTQELTMDDFKEILQRRA
DEEDVELDQKAVDFLAKIAQETSLRYSIQLLTTSKLISEKRGAKVVNYDHLSEAFNLFLD
VKRSVDLLEKHGDEYMFHNNQGPIQTQSTQNSIKEEIKVEVKRGRGRQKAEVKIDEDE
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgacaacgccattgtcacgtattggtgctcattctcatgttcgtggcttaggattatct
gatgatctgtcaccagaatctcgtgaaggtcttgttggctaaccacgtgctcgtcgtgct
gcaggtatagttcaatcacttattttggagaataagcttgctggccgtgcattattaatt
tcaggacgtcctggttctggaaaaacagctcttgcacatgctcttgcttaatcattaggt
agctaagttccttttgtaggtgtctctgcatcggagtttttctcgttagaagttaattaa
accgaggctcttacataggctattcgacgtgctatatcagtataaattccagaagagacg
gatttaattgaaggtgaagttgcaatgattcgcattgatgaatcagctaatggaaacggt
gaaaaagttggtaaagttatacttaaaacatctgacatggaaagctcattcgatatcgga
ccaaaaatgattgagatgcttaataaagagtctgttcgtgttggtgatgttataagcatt
gataaaatgactggaagaattactaagttaggtagagttatgagcagtgcttaagatttt
gatgttttggctcaatagacaaaacttttaccagcaccaacaggtgaattaatgaaaaga
agaagtgttgaacatgttgttacgttacatgatatggatgttataaattcacgctcataa
ggctttttagctttgttttctggcgaaacaggtgaaatctcaaatgaagttcgtgactaa
gttgattaaaaggtggctttgtggaaagaagaaggacgtgcaactgttacctctggtgtt
ctttttattgatgaatgccatattttaacaatggaagtatactcatttttgaatagagtt
ttggaatccgaagtatcccccgtcgttatctttgcaacaaacagaggatatactaaaatt
agaggaaccgagtatctttctccttttggtattccaattgatctccttgatagattattg
atcattaatacgtaagaacttacgatggatgattttaaagaaatattataaagaagggct
gatgaagaagatgtagaattagattaaaaggctgtagatttcttagcaaagatagcttaa
gaaaccagtttgagatattctatctaacttttaacaacatcaaaacttatatctgaaaaa
cgaggtgccaaagttgttaattacgaccatttatctgaagcctttaaccttttcttggat
gtaaaaagaagtgtagacctattagaaaaacatggagatgaatatatgttccataataat
taaggtcctatttagacataatctactcaaaatagtatcaaagaggagattaaggtggaa
gtaaaaagaggaagaggcagatagaaggctgaggtcaaaattgatgaagacgagtga
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