Spironucleus salmonicida: 94299511
Help
Entry
94299511 CDS
T10465
Symbol
SS50377_25488
Name
(RefSeq) WD40 repeat protein
KO
K11805
DDB1- and CUL4-associated factor 7
Organism
ssao Spironucleus salmonicida
Pathway
ssao03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ssao00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
94299511 (SS50377_25488)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ssao04121
]
94299511 (SS50377_25488)
03036 Chromosome and associated proteins [BR:
ssao03036
]
94299511 (SS50377_25488)
Ubiquitin system [BR:
ssao04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
94299511 (SS50377_25488)
Chromosome and associated proteins [BR:
ssao03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.3/1.5)
94299511 (SS50377_25488)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_RIG_2nd
WD40_Prp19
Beta-prop_WDR3_1st
WD40_CDC20-Fz
WD40
Beta-prop_WDR36-Utp21_1st
WD40_WDHD1_1st
WDR55
Beta-prop_EIPR1
Beta-prop_Aladin
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_WDR3_2nd
Beta-prop_EML
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
Beta-prop_TEP1_2nd
ANAPC4_WD40
Beta-prop_WDR19_1st
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
Beta-prop_WDR90_POC16_2nd
WD40_RFWD3
WD40_MABP1-WDR62_2nd
Beta-prop_Vps41
MIOS_WD40
Beta-prop_HPS5
WD40_MABP1-WDR62_1st
Beta-prop_WDR35_TULP_N
Tricorn_2nd
Beta-prop_DCAF4
Beta-prop_WDR41
PEP5_VPS11_N
Beta-prop_ACSF4
WD_LRWD1
Cytochrom_D1
Motif
Other DBs
NCBI-GeneID:
94299511
NCBI-ProteinID:
XP_067764141
UniProt:
A0A9P8LSA1
LinkDB
All DBs
Position
5:1529463..1530335
Genome browser
AA seq
290 aa
AA seq
DB search
MRLAICSCDLEHKNFVEVIQFNKQSQQLLKLDSFNLQFPVTKAMFYPNYQTSNQDLLICA
NDMLRIFSINQDQRKQKLTQKSFLRHEKRRQAPVTAFDWSTIQPHLVIQSSYDTAISLWD
INREELEFTFQAHEKSINDVSFSPADPSIFASCASDGTVRVFDRRKIEISQQITQLDNQA
LRVQFNKFDPHQLAIISNNNNQIHIYDLRNVQHVLNLEKHEKEVNGIAWNPTCANQLLSV
GEDGNALIWEGGKAIMGYNCGEPADNCGWSELNKEWCSLIHGDILEILHV
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctagctatatgctcgtgtgatttggaacacaaaaactttgttgaagtaatctaa
tttaataaatagtcccagcaacttttaaaacttgactcatttaatctacaatttccagtt
actaaagcaatgttctatcctaattactaaacgagtaactaagacttactaatttgtgca
aatgatatgctgcgaattttctcaataaactaggattagcgtaagcagaaactgacatag
aaatcatttcttcgtcatgaaaagcggcgttaagcaccagttactgcatttgactggtca
acgatccagcctcatcttgtgatttagtcatcttatgataccgcgatttcactctgggat
attaaccgagaggaacttgagttcacatttcaagcacatgagaaatctataaatgatgtt
tcattttcacctgctgatccttctatatttgcttcttgtgcgtcagatggtactgttcgt
gtttttgataggcgaaagatagaaatttcataataaataacttaattagataatcaagca
ctgcgagtctaattcaataaattcgacccgcattaactggcgattatcagtaataacaat
aatcaaatacatatatacgatttacgaaatgtctagcatgttttaaacttagaaaagcat
gaaaaagaggtaaacggcatagcttggaacccaacttgtgctaatcaacttttaagcgtt
ggtgaggatggtaatgcactaatttgggaggggggaaaagcaatcatgggttacaactgt
ggtgaaccagcggacaattgtgggtggagcgagttaaataaggagtggtgcagcttgatt
catggggatattctagaaattttacatgtatga
DBGET
integrated database retrieval system