Spironucleus salmonicida: 94299674
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Entry
94299674 CDS
T10465
Symbol
SS50377_25651
Name
(RefSeq) DNA topoisomerase
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
ssao Spironucleus salmonicida
Pathway
ssao03440
Homologous recombination
ssao03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ssao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
94299674 (SS50377_25651)
03460 Fanconi anemia pathway
94299674 (SS50377_25651)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssao03032
]
94299674 (SS50377_25651)
03400 DNA repair and recombination proteins [BR:
ssao03400
]
94299674 (SS50377_25651)
Enzymes [BR:
ssao01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
94299674 (SS50377_25651)
DNA replication proteins [BR:
ssao03032
]
Eukaryotic type
DNA Topoisomerases
94299674 (SS50377_25651)
DNA repair and recombination proteins [BR:
ssao03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
94299674 (SS50377_25651)
FA (Fanconi anemia) pathway
94299674 (SS50377_25651)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Zn_ribbon_TOP3B
Toprim_2
TMEM106_N
Toprim_4
Motif
Other DBs
NCBI-GeneID:
94299674
NCBI-ProteinID:
XP_067762239
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Position
6:complement(96956..99610)
Genome browser
AA seq
884 aa
AA seq
DB search
MTTLFISEKPSIAQSIARLLSPNVSSQSSSSTPVYSFPFSFKQAKQAISTSVAGHLYQII
FNTKLQSWQTPEEELLEQKGVEYETTKGAGGIIRQLQALSKNAKYIILALDNDREGENIC
FEVLKSIGKFNGDIFRLRFSALTKEEITRQLGKVDKPNQYLSDAVEVRQELDLKVGVAFT
RFQTQFLSGKYSNLQTNCISYGPCQTPTLAFCVERHLEILNFKPKRYYNVDVQIKDSKGN
IEKIDFISENKIFEQDMGLHIIKQLNGGKVKVISIKQSKSKSVKPIALNTVAMLKLASTS
LNMSPQESMYKAEFLYLQGYLTYPRTESTSYPKEFNFMEVIKNIKFNYAYDAIETINKYG
AKPRSGVDAGDHPPITPTSKCAQDLSGMDLSFYNMICKNFLASLMPDAEFYIKTVELQCE
QHKFHVKSKEYITFGWQILYKQSDLADDEQYEVTQISYQKDDVFDFYELNLKEKYTTPPT
YLTESNLLSLMEKNLIGTDASMAQHIQNVQDRNYVQLLPGKRQLQPTQLGIQLIQGLKLI
DKELVAPNLRSKMEQDLNKVAEGKISKVKMINEQLTKYLNKFQFFKQNINLLDQLFESKF
QTIKSAGKPFISCPQCNKFTKFISLIPQRIYCGTCDRIYSVIQCQKHYEIQKIRCAYCNC
PPISAAGEKRTNFCPKCYTDGNEDMVKDLEEFGYKSDGKGLTCNQCMNQSCPLSLRNNYI
SDCPACSKGGCDKLILGSQTSAKIEEKFKITIDEFDIQIEKPVGKSEKIQQQIYLQSKLY
LDNFSIPSSSQITCTSCQATANLPQGQPLILGEFCECGARKIEIKTKEGLVTGCGLCSIE
GVEIKMSSEKVSWKSNNNNRNGRKGQTSGHKDQGSKKSKQHQKK
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atgaccacattatttatttctgagaaaccttcaatcgctcaatctattgcaagactttta
tcaccaaatgtatcttcttagagttcatcatctactcctgtttattcattcccattttct
tttaaataagctaaataagcaatttccacatctgtcgcaggccatttatatcaaattata
tttaatactaaactacagtcttggtaaacaccggaagaagaattattagaacagaaaggt
gtagagtatgaaactacaaaaggagcaggtggaatcattagataattataagctttgtcc
aaaaatgctaaatatattatactagcattagataatgatagagaaggggaaaatatttgt
tttgaagtgctaaagtctattggtaagtttaatggtgatatttttagattaagattctca
gctttaactaaagaagaaataactagataattaggaaaagttgataaaccaaattaatat
ttatctgatgcagttgaggtaagacaagagttagatttaaaagtaggtgttgcatttaca
cgtttttaaacatagtttctatctggaaaatattctaacctttaaactaattgtataagt
tatggtccgtgctagactccaactttagcattttgtgttgaacgtcatttggaaatacta
aactttaaacctaaaagatattataatgttgatgtttaaatcaaagattctaaaggaaat
attgaaaaaattgattttatttcagaaaataaaatttttgaataagacatgggtttacat
attattaaataattaaatggtggaaaagtaaaggtaataagcattaagtaaagtaaatct
aaatcagtaaaacctattgctttgaatacagttgcaatgttgaaattagcttcgacatca
ctaaatatgtcgccataagagtctatgtataaagctgaatttttatatctttaaggatat
ttaacctatcctagaacagaatctacaagttatccaaaagaatttaattttatggaagtt
attaagaatatcaaatttaattatgcttatgatgcaattgaaacaataaacaagtatggt
gcaaagcctagaagtggagtagatgctggagatcatcctcctattacacctacttcaaaa
tgtgcttaagatttatctggaatggacttatcattttataatatgatttgtaagaatttt
ttagcttctttaatgcctgatgcagaattttatattaaaactgtagagctataatgtgaa
taacataaatttcatgttaaatctaaagaatatattacgtttggatggtaaatattatat
aagcagtcagatttagcagatgatgaataatacgaagttacataaataagttattaaaaa
gatgatgtttttgatttctatgaattgaatctaaaagaaaaatacacaacacccccaact
tatttaacagaatcaaatttattaagtttgatggagaagaatctaattggtacagatgct
tctatggcttagcatatacagaatgtataagatagaaattatgtttagcttttaccagga
aagcgttaattacaaccaactcaacttggcattcagttaatttaaggattaaaactgatt
gataaagaactagttgcccctaatctccgatctaaaatggagtaagatttaaataaagtg
gcagaaggaaaaatttccaaagttaaaatgattaatgaacaattaacaaaatatcttaat
aaattttaattttttaagtagaatatcaatctactagattaactttttgaatctaaattt
caaactattaaatctgcaggaaaaccttttatttcgtgtccatagtgtaataaattcaca
aaattcatatcacttattccacagcgtatttattgtggaacttgcgatcgtatttattca
gtaatatagtgttaaaaacattatgaaattcaaaaaattcgatgtgcatattgtaattgc
ccgccaatttcggctgcaggtgaaaaaagaactaatttttgccctaaatgttacacagat
ggtaatgaagatatggtaaaagatttagaagaatttgggtacaaatcagacggaaaaggt
ttaacttgtaaccaatgcatgaactaaagttgtcctttatcattgagaaacaattatatt
tcagactgtcctgcttgttcaaaaggaggatgtgataaattaattttaggatcttagact
tcagctaagatagaagaaaagtttaaaattacaattgacgaatttgatatttaaatcgaa
aagcctgttggcaaatctgaaaaaatttagtaataaatttacctttagtcaaaattatat
ttagataatttctctattcctagcagctcttaaataacatgtacatcttgttaagctaca
gcaaatttacctcaaggtcaacctttaatactaggggaattctgtgagtgtggtgctaga
aaaattgaaataaagaccaaagaaggtctagtaaccgggtgtggattatgtagtattgaa
ggtgtagaaattaaaatgtcatcagaaaaagtaagttggaaaagtaacaataataataga
aatggtagaaaaggtcaaactagtggccataaggaccaaggttctaaaaaaagtaagcag
cattagaagaagtga
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