Spironucleus salmonicida: 94300077
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Entry
94300077 CDS
T10465
Symbol
SS50377_26054
Name
(RefSeq) putative TPR repeat family protein
KO
K19683
tetratricopeptide repeat protein 30
Organism
ssao Spironucleus salmonicida
Brite
KEGG Orthology (KO) [BR:
ssao00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ssao03037
]
94300077 (SS50377_26054)
Cilium and associated proteins [BR:
ssao03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
94300077 (SS50377_26054)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_19
TPR_16
TPR_2
TPR_14
ANAPC3
TPR_7
TPR_1
TPR_11
TPR_CcmH_CycH
TPR_6
TPR_8
TPR-S
SRP_TPR_like
TPR_9
TPR_Slam
DUF6823
ATG16
TPR_P4H
GeBP-like_DBD
Motif
Other DBs
NCBI-GeneID:
94300077
NCBI-ProteinID:
XP_067762631
LinkDB
All DBs
Position
6:<784321..>786342
Genome browser
AA seq
673 aa
AA seq
DB search
MQQLYQVPEGQLTRTIYKHIENQEFDEAINVLKLQLQMFPNNSPACSILAYCYYHKGEFD
LAIPLYEQLVKKYPDSERYQLSLANSRYKADMLVEALQLKIDSHDADVLRAYCKHDIDDS
NALQNLVEKLTKSPTDDPRVFALKANLLLKQEKFQEAIDLYDAANEICPDPRIFYAKAVA
FYRQSDYPHCLKTLGDLVDLSAKKYPELVQAAQSFNGAGEVESQTVIQNLNHLLGSALID
AFNLKASIEWNLGDEYAANRALKSMPYRKEEDLDPVTLHNLALSEMMHQPSQAVKKLQFL
IQVPPFPVEAFQNLINIYIQHGLFDLAADLMAENQQLSQASLEPEKQAFFQAVVQSIASP
EEAYSQLDQLKQRYANQLRRIRQEITQTRSKSSKNKQAADEFTGRFNTNEAKTMSKEEIA
VNTLLQQYEQKLGIFIPVITWQTSILYNLKRYKGAYHIICQYEDLIEDHPSYKINQANIL
FANEDYADALEKYQEVVDTLGQENILDVPAIAVANLCVCYVLNSQNNLAEQLMQKVDTAQ
TQITNVSPESSNQLLHLSITNIVLGALYAINQNMPFGIRRIIAAMEPTSEKLSPDSWLYV
KRPLVSLAEACSMNLGGPAEEQLIDHVLLFLDEVIKYGEEMSINPTAVGFAGVTEKNISE
EARALKSIYLQLM
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgcagtaactctatcaggtccctgaaggccagctcacgcgcactatctacaagcacatt
gaaaaccaagagttcgacgaggctatcaacgtcctgaagctccagcttcagatgttcccc
aacaactcgccagcgtgctccattttagcctactgctactaccacaagggcgaattcgac
ctcgcaattcctctctacgagcaactggtcaagaaatacccagactccgagcgctaccag
ctatcgctagcgaactcgcgctacaaggccgatatgctcgtcgaggcgctccagctcaaa
atcgactcgcacgacgcggacgttctgagggcgtactgcaagcacgatatcgacgattct
aacgccctccagaacctcgtcgaaaagctcacaaaatcgcccaccgacgacccgcgcgtc
ttcgctctgaaggccaatttgctcctcaaacaggaaaagttccaggaggccatcgacctc
tacgacgcagcgaacgaaatatgcccggacccgcgaattttctacgcaaaagccgtcgct
ttctaccgccaaagcgactacccgcactgcctgaaaacgctcggcgatttggtcgatttg
agcgccaagaagtacccggaactcgtccaggcggcgcagagcttcaacggcgcaggagaa
gtggaaagtcaaactgtaattcagaatctgaaccatttgctcggttctgcgctcatcgac
gccttcaacttaaaggcgtcaattgagtggaatttgggcgacgaatacgccgcaaatcgc
gctctgaagagcatgccgtatcgcaaagaggaggatttggatcctgttacactgcacaat
ttggcgctcagcgagatgatgcattagccgagttaggccgtcaaaaagctccaatttctg
attcaggtgccgccttttccggtggaggcatttcagaacttgataaatatctacattcag
cacggtttgttcgatctggcggctgatttgatggctgaaaattagcagctgagccaggcg
agtttggagcccgaaaagcaagcatttttctaggcagtcgtttagagcatcgcgagccca
gaagaagcgtattcgcagttggatcagctgaagcagagatatgctaatcagcttagacga
attcgttaggaaatcacgcaaacgcgctcaaaatcgtccaaaaacaagcaagcggcggac
gaatttaccggaagattcaacacgaacgaggcgaaaacgatgtctaaagaggagattgcg
gtcaacacgctgctgcagcaatatgaacaaaagctcgggatcttcattcccgtgattacc
tggcaaacgtcgattttgtacaatttgaagcgctacaaaggcgcgtatcacattatttgc
caatacgaagatttgatcgaggatcacccctcctacaagatcaattaggccaatattcta
tttgccaatgaagattacgcggacgcgctcgaaaagtaccaggaggtcgtcgatacgctc
ggccaggagaacattttagacgttccggccatcgcggtggcgaatctctgcgtttgttac
gtgttgaactctcagaacaacttagccgagcagctgatgcagaaggtggacacagcgcag
acataaataacgaacgtttcgcctgaatcgtcgaaccagctcctgcatttgtcgataacg
aacatcgtgctgggcgcactctacgcgatcaatcagaacatgccgttcggtattaggcgt
ataattgcggccatggagcccacgagcgagaagctcagccccgactcttggctgtacgtc
aaaaggccgctcgtgagcctcgcggaggcctgctcgatgaatctgggcggccccgccgag
gagcagctcatcgaccatgttctgctgttcctggacgaggtcatcaaatacggcgaggaa
atgagcattaaccccacggcagtcgggttcgcgggtgtgactgaaaagaacatcagcgag
gaggccagggcgctcaaatcaatctatttgcagttgatgtga
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