KEGG   Spironucleus salmonicida: 94300138
Entry
94300138          CDS       T10465                                 
Symbol
SS50377_26115
Name
(RefSeq) LSM domain-containing protein
  KO
K12621  U6 snRNA-associated Sm-like protein LSm2
Organism
ssao  Spironucleus salmonicida
Pathway
ssao03018  RNA degradation
ssao03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ssao00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    94300138 (SS50377_26115)
  09123 Folding, sorting and degradation
   03018 RNA degradation
    94300138 (SS50377_26115)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ssao03019]
    94300138 (SS50377_26115)
   03041 Spliceosome [BR:ssao03041]
    94300138 (SS50377_26115)
Messenger RNA biogenesis [BR:ssao03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     94300138 (SS50377_26115)
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     94300138 (SS50377_26115)
Spliceosome [BR:ssao03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    94300138 (SS50377_26115)
 Complex C
  U2 snRNP components
    94300138 (SS50377_26115)
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 94300138
NCBI-ProteinID: XP_067762688
LinkDB
Position
6:complement(894626..894856)
AA seq 76 aa
MLFDNLLIENRIATVQLKSGMYFTGNLIGADTYMNIRLNNLTFQKHEDYGYLSNLKEIFI
RGDKIKFITFENKDMS
NT seq 231 nt   +upstreamnt  +downstreamnt
atgctatttgacaatttactaattgagaatcgcatcgcaactgtataactcaaaagtggt
atgtattttacaggaaatttgataggtgctgatacatatatgaatatccgcttgaataac
ttaacgttctaaaaacacgaagattatggctatttatcgaatctaaaagaaatattcatt
cgtggagacaaaattaagtttattaccttcgaaaacaaagatatgagttga

DBGET integrated database retrieval system