Spironucleus salmonicida: 94300752
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Entry
94300752 CDS
T10465
Symbol
SS50377_26729
Name
(RefSeq) DNA repair helicase RAD3
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
ssao Spironucleus salmonicida
Pathway
ssao03022
Basal transcription factors
ssao03420
Nucleotide excision repair
Brite
Enzymes [BR:
ssao01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
94300752 (SS50377_26729)
Transcription machinery [BR:
ssao03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
94300752 (SS50377_26729)
Chromosome and associated proteins [BR:
ssao03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
94300752 (SS50377_26729)
DNA repair and recombination proteins [BR:
ssao03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
94300752 (SS50377_26729)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
94300752
NCBI-ProteinID:
XP_067761222
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Position
7:complement(101249..103207)
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AA seq
652 aa
AA seq
DB search
MQTNQNSQIPFFPFTPQQPQLDFYKFIYGSLSKPAVILTELNTGGGKTLLSACAALNQPK
RRIIYATRTFQEVLNVVNQLKKLKTTFSLSFLASKQKTCINPDVRFSSDIDHTCSQIYRN
CQFYQNSLNYHSQNINDMEDFEVAQICPFFANRAASKTAKFVVCSYNYIFDSEISALNEF
DESSILIVDEAHNIPKVATSSISAQFTKNECEKCAQDIAILIKALKSITTIKSLPLQFIL
QLQIILNEIKILKNIESARVYDVQFETSRIISQQKYDKNMLLEGIRYLKIVVQVLKQANI
SIVISKQIINLTKFASILMYVDLYPNQAYKFALTVDYPFMKFEDSTKIILANQRNIVELT
CLDCAIGIEKIIKGFTNIIFMSGTLRPFHISKQIMGLDRLQFKYQLNIIQFSTYLDKNFK
LFLLTSGLNREEITLNFTHRFEQNTVVSVANVLIQLSKTVSDGILLFFPSFAFLEQFAAF
TQMLNLKIQGNRLIFFESNNTLESQHALNCHMVACDMGRGSIFCAVARGSFAEGIDIGSQ
YGRLVVIIGVPYMFRQSARIQAQMKFYQSLDISEDEYMEFDALQITQQAVGRICRKSSEY
GCILFVESRFKPVVRMLDHWAKSKGFKETHARQIIQGIKDFLLEQQMHKIKE
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgtagaccaattagaatagttaaattccatttttcccattcacaccataataacctcaa
cttgacttttataaatttatttacggatcactttctaaaccagctgtaattttaactgag
cttaatacaggaggtggcaaaacgcttttatctgcatgtgctgccttaaactagcctaaa
cgtagaataatttatgctactaggacattttaagaagtacttaacgtagttaactaattg
aaaaaacttaaaactacattttcactttcatttctggcatctaagcaaaaaacttgtatt
aatccagatgtaagattttcatcagatatcgatcatacatgcagtcaaatatacagaaac
tgctaattctactaaaattctctcaattaccattcgcaaaatataaatgatatggaagat
tttgaggttgcataaatctgcccattttttgctaaccgggcagcatctaaaacagcaaaa
tttgtagtatgttcatataattatatttttgactcagaaatatctgcattaaatgaattt
gacgaatcatctatccttatcgttgatgaagctcataatatcccaaaagtagctacctca
tcaatcagtgcttaattcactaaaaatgaatgcgaaaagtgcgcataagatattgctata
ttaattaaggcattaaagtcaattactactattaaatctttaccattgtagttcatatta
tagctttaaataattctgaatgaaattaagatacttaaaaatattgaatcagctcgcgtt
tatgatgtgtagtttgaaactagtaggataatttcttagcagaagtatgataaaaatatg
cttcttgagggtataagatatcttaaaatagttgtttaggtgctaaaataagccaatatt
tcaattgttatttcgaaacaaataattaatttgacaaaatttgcctccattttaatgtat
gtggatctctatccgaactaggcttacaagtttgctttgacagtagattatcctttcatg
aaattcgaagactctactaaaattatacttgcaaactagagaaatatagtagaattaaca
tgtttagattgtgctattggtattgaaaagataattaagggttttactaatataatattc
atgtcaggaacattacgaccattccatatttcaaaacaaataatggggttagatagactt
taatttaagtattaattaaatattatataatttagcacctatttagataaaaattttaaa
ctttttttgctaactagtggactaaatcgtgaagagataactcttaattttactcacagg
ttcgaataaaatactgttgtatcagttgctaacgtgcttatataattatctaaaacagta
tctgatggtattttgctattctttccttcttttgcatttcttgagtaatttgctgcattc
acataaatgttaaatttgaagatttaagggaataggttgatattttttgaatctaataac
acactagaatcgcaacatgcactcaattgtcacatggttgcgtgtgacatggggagggga
tctattttttgtgctgtcgctagaggaagttttgctgaaggtattgatataggaagctag
tatggtagattagtagttattataggcgtaccatatatgtttagacaaagtgcaaggatt
taggcataaatgaaattttatcaaagtttagatatatcagaggatgaatatatggagttt
gatgctctataaatcacataataagctgttgggaggatttgtagaaaatcttctgaatac
gggtgcatattgtttgtagaatcgagattcaaaccagtggtacggatgcttgatcactgg
gcgaaatcaaaaggttttaaggagacacacgctcgctaaataatataaggaataaaagat
tttttattagaataataaatgcataaaattaaagaatga
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